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Data Summary

Genomes analysed CRISPRs found (*)
Archea 150 563(126)
Bacteria 2612 3502(1176)
Total 2762 4065(1302)

*number of convincing CRISPR structures (number of genomes with such CRISPR)

Database status:
Last update : 2014-08-05

Contact:
Christine POURCEL


Genomes analysed CRISPRs found Strains with convincing CRISPR(s) Strains devoid of detectable CRISPRs
Archea 150 563 126 24
Bacteria 2612 3502 1176 873
Total 2762 4065 1302 897

Click on strain name to get more information.

Bacteria

'Nostoc azollae' 0708     (1 CRISPR, 3 questionable structures)
Acaryochloris marina MBIC11017     (1 CRISPR, 2 questionable structures)
Acetobacter pasteurianus 386B
Acetobacter pasteurianus IFO 3283-01     (1 CRISPR)
Acetobacter pasteurianus IFO 3283-01-42C     (1 CRISPR)
Acetobacter pasteurianus IFO 3283-03     (1 CRISPR)
Acetobacter pasteurianus IFO 3283-07     (1 CRISPR)
Acetobacter pasteurianus IFO 3283-12     (1 CRISPR)
Acetobacter pasteurianus IFO 3283-22     (1 CRISPR)
Acetobacter pasteurianus IFO 3283-26     (1 CRISPR)
Acetobacter pasteurianus IFO 3283-32     (1 CRISPR)
Acetobacterium woodii DSM 1030     (1 CRISPR)
Acetohalobium arabaticum DSM 5501     (1 CRISPR)
Acholeplasma brassicae     (1 questionable structure)
Acholeplasma laidlawii PG-8A     (2 questionable structures)
Acholeplasma palmae J233     (1 CRISPR)
Achromobacter xylosoxidans A8     (1 questionable structure)
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061
Achromobacter xylosoxidans NH44784-1996     (2 questionable structures)
Acidaminococcus fermentans DSM 20731     (1 CRISPR, 3 questionable structures)
Acidaminococcus intestini RyC-MR95     (1 CRISPR)
Acidimicrobium ferrooxidans DSM 10331     (2 CRISPRs)
Acidiphilium cryptum JF-5     (2 CRISPRs, 1 questionable structure)
Acidiphilium multivorum AIU301
Acidithiobacillus caldus SM-1     (3 CRISPRs, 1 questionable structure)
Acidithiobacillus ferrivorans SS3
Acidithiobacillus ferrooxidans ATCC 23270     (4 CRISPRs, 2 questionable structures)
Acidithiobacillus ferrooxidans ATCC 53993     (2 questionable structures)
Acidobacteria bacterium Ellin345     (4 questionable structures)
Acidobacterium capsulatum ATCC 51196     (1 CRISPR)
Acidobacterium sp. MP5ACTX9     (3 questionable structures)
Acidothermus cellulolyticus 11B     (1 CRISPR, 7 questionable structures)
Acidovorax avenae subsp. avenae ATCC 19860     (6 CRISPRs)
Acidovorax avenae subsp. citrulli AAC00-1
Acidovorax sp. JS42     (2 CRISPRs, 2 questionable structures)
Acidovorax sp. KKS102
Acinetobacter baumannii 1656-2
Acinetobacter baumannii AB0057     (1 CRISPR, 2 questionable structures)
Acinetobacter baumannii AB307-0294     (1 CRISPR, 3 questionable structures)
Acinetobacter baumannii ACICU
Acinetobacter baumannii ATCC 17978     (1 questionable structure)
Acinetobacter baumannii AYE     (1 CRISPR, 3 questionable structures)
Acinetobacter baumannii BJAB07104     (1 questionable structure)
Acinetobacter baumannii BJAB0715     (1 questionable structure)
Acinetobacter baumannii BJAB0868     (1 questionable structure)
Acinetobacter baumannii D1279779     (1 questionable structure)
Acinetobacter baumannii MDR-TJ
Acinetobacter baumannii MDR-ZJ06
Acinetobacter baumannii SDF     (1 questionable structure)
Acinetobacter baumannii TCDC-AB0715
Acinetobacter baumannii TYTH-1
Acinetobacter baumannii ZW85-1
Acinetobacter calcoaceticus PHEA-2     (1 questionable structure)
Acinetobacter sp. ADP1     (3 CRISPRs)
Acinetobacter sp. DR1
Actinobacillus pleuropneumoniae L20     (1 CRISPR)
Actinobacillus pleuropneumoniae serovar 3 str. JL03     (1 CRISPR)
Actinobacillus pleuropneumoniae serovar 7 str. AP76     (1 CRISPR)
Actinobacillus succinogenes 130Z     (2 CRISPRs)
Actinobacillus suis H91-0380     (1 CRISPR, 1 questionable structure)
Actinoplanes friuliensis DSM 7358     (2 questionable structures)
Actinoplanes missouriensis 431     (3 CRISPRs, 14 questionable structures)
Actinoplanes sp. N902-109     (5 CRISPRs, 8 questionable structures)
Actinoplanes sp. SE50/110     (5 questionable structures)
Actinosynnema mirum DSM 43827     (3 questionable structures)
Adlercreutzia equolifaciens DSM 19450     (6 questionable structures)
Advenella kashmirensis WT001
Aequorivita sublithincola DSM 14238     (1 questionable structure)
Aerococcus urinae ACS-120-V-Col10a
Aeromonas hydrophila ML09-119     (1 CRISPR, 2 questionable structures)
Aeromonas hydrophila subsp. hydrophila ATCC 7966     (9 questionable structures)
Aeromonas salmonicida subsp. salmonicida     (2 questionable structures)
Aeromonas veronii B565     (5 questionable structures)
Aeropyrum camini SY1 = JCM 12091     (4 CRISPRs, 1 questionable structure)
Aggregatibacter actinomycetemcomitans ANH9381     (1 CRISPR)
Aggregatibacter actinomycetemcomitans D11S-1
Aggregatibacter actinomycetemcomitans D7S-1     (3 CRISPRs)
Aggregatibacter aphrophilus NJ8700     (1 CRISPR)
Aggregatibacter phage S1249
Agrobacterium radiobacter K84
Agrobacterium sp. H13-3
Agrobacterium tumefaciens str. C58
Agrobacterium vitis S4     (1 questionable structure)
Agromonas oligotrophica S58
Akkermansia muciniphila ATCC BAA-835     (2 CRISPRs)
Alcanivorax borkumensis SK2
Alcanivorax dieselolei B5     (1 CRISPR, 3 questionable structures)
Alicycliphilus denitrificans BC     (2 CRISPRs, 1 questionable structure)
Alicycliphilus denitrificans K601     (1 CRISPR)
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446     (4 CRISPRs)
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1     (3 CRISPRs)
Aliivibrio salmonicida LFI1238
Alistipes finegoldii DSM 17242     (3 questionable structures)
Alistipes shahii WAL 8301     (1 CRISPR, 2 questionable structures)
Alkalilimnicola ehrlichei MLHE-1     (1 CRISPR, 3 questionable structures)
Alkaliphilus metalliredigens QYMF     (2 CRISPRs, 2 questionable structures)
Alkaliphilus oremlandii OhILAs     (1 questionable structure)
Allochromatium vinosum DSM 180     (3 CRISPRs, 2 questionable structures)
alpha proteobacterium HIMB5
alpha proteobacterium HIMB59
Alteromonas macleodii 'Deep ecotype'     (1 CRISPR, 2 questionable structures)
Alteromonas macleodii AltDE1
Alteromonas macleodii ATCC 27126
Alteromonas macleodii str. 'Aegean Sea MED64'     (1 questionable structure)
Alteromonas macleodii str. 'Balearic Sea AD45'
Alteromonas macleodii str. 'Black Sea 11'     (1 questionable structure)
Alteromonas macleodii str. 'English Channel 615'     (1 questionable structure)
Alteromonas macleodii str. 'English Channel 673'     (1 questionable structure)
Alteromonas macleodii str. 'Ionian Sea U4'     (1 questionable structure)
Alteromonas macleodii str. 'Ionian Sea U7'     (2 questionable structures)
Alteromonas macleodii str. 'Ionian Sea U8'     (2 questionable structures)
Alteromonas macleodii str. 'Ionian Sea UM4b'     (1 questionable structure)
Alteromonas macleodii str. 'Ionian Sea UM7'     (2 questionable structures)
Alteromonas sp. SN2     (1 questionable structure)
Aminobacterium colombiense DSM 12261     (1 CRISPR)
Ammonifex degensii KC4     (8 CRISPRs, 2 questionable structures)
Amphibacillus xylanus NBRC 15112
Amycolatopsis mediterranei RB     (4 CRISPRs, 6 questionable structures)
Amycolatopsis mediterranei S699     (9 CRISPRs, 14 questionable structures)
Amycolatopsis mediterranei U32     (4 CRISPRs, 8 questionable structures)
Amycolatopsis orientalis HCCB10007     (2 questionable structures)
Amycolicicoccus subflavus DQS3-9A1
Anabaena cylindrica PCC 7122     (13 CRISPRs, 9 questionable structures)
Anabaena sp. 90     (2 CRISPRs, 8 questionable structures)
Anabaena variabilis ATCC 29413     (11 CRISPRs, 4 questionable structures)
Anaerobaculum mobile DSM 13181     (3 CRISPRs)
Anaerocellum thermophilum DSM 6725     (9 CRISPRs)
Anaerococcus prevotii DSM 20548
Anaerolinea thermophila UNI-1     (5 CRISPRs, 2 questionable structures)
Anaeromyxobacter dehalogenans 2CP-1     (2 CRISPRs, 3 questionable structures)
Anaeromyxobacter dehalogenans 2CP-C     (5 questionable structures)
Anaeromyxobacter sp. Fw109-5     (1 questionable structure)
Anaeromyxobacter sp. K     (2 CRISPRs, 4 questionable structures)
Anaplasma centrale str. Israel     (1 questionable structure)
Anaplasma marginale str. Dawn     (1 questionable structure)
Anaplasma marginale str. Florida
Anaplasma marginale str. Gypsy Plains
Anaplasma marginale str. St. Maries
Anaplasma phagocytophilum HZ     (1 questionable structure)
Anaplasma phagocytophilum str. Dog2     (1 questionable structure)
Anaplasma phagocytophilum str. HZ2     (1 questionable structure)
Anaplasma phagocytophilum str. JM     (1 questionable structure)
Anoxybacillus flavithermus WK1     (3 CRISPRs)
Aquifex aeolicus VF5     (11 CRISPRs)
Arcanobacterium haemolyticum DSM 20595     (1 CRISPR, 1 questionable structure)
Arcobacter butzleri 7h1h
Arcobacter butzleri ED-1
Arcobacter butzleri RM4018
Arcobacter nitrofigilis DSM 7299     (1 CRISPR)
Arcobacter sp. L     (1 CRISPR)
Arthrobacter arilaitensis Re117
Arthrobacter aurescens TC1     (7 questionable structures)
Arthrobacter chlorophenolicus A6     (1 CRISPR, 1 questionable structure)
Arthrobacter phenanthrenivorans Sphe3     (1 questionable structure)
Arthrobacter sp. FB24     (2 questionable structures)
Arthrobacter sp. Rue61a
Arthrospira platensis NIES-39     (8 CRISPRs, 10 questionable structures)
Aster yellows witches'-broom phytoplasma AYWB
Asticcacaulis excentricus CB 48
Atopobium parvulum DSM 20469
Azoarcus sp. BH72     (3 questionable structures)
Azoarcus sp. EbN1     (5 CRISPRs)
Azoarcus sp. KH32C
Azorhizobium caulinodans ORS 571
Azospirillum brasilense Sp245
Azospirillum lipoferum 4B     (3 CRISPRs, 2 questionable structures)
Azospirillum sp. B510     (7 CRISPRs, 1 questionable structure)
Azotobacter vinelandii CA     (2 CRISPRs, 1 questionable structure)
Azotobacter vinelandii CA6     (2 CRISPRs, 1 questionable structure)
Azotobacter vinelandii DJ     (2 CRISPRs, 1 questionable structure)
Bacillus amyloliquefaciens CAU-B946
Bacillus amyloliquefaciens CC178
Bacillus amyloliquefaciens DSM7
Bacillus amyloliquefaciens FZB42
Bacillus amyloliquefaciens IT-45
Bacillus amyloliquefaciens LFB112
Bacillus amyloliquefaciens LL3
Bacillus amyloliquefaciens subsp. plantarum AS43.3
Bacillus amyloliquefaciens subsp. plantarum NAU-B3
Bacillus amyloliquefaciens subsp. plantarum UCMB5033
Bacillus amyloliquefaciens subsp. plantarum UCMB5036
Bacillus amyloliquefaciens subsp. plantarum UCMB5113
Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2
Bacillus amyloliquefaciens TA208
Bacillus amyloliquefaciens XH7
Bacillus amyloliquefaciens Y2
Bacillus anthracis str. 'Ames Ancestor'     (2 questionable structures)
Bacillus anthracis str. A0248     (1 CRISPR, 2 questionable structures)
Bacillus anthracis str. A2012
Bacillus anthracis str. Ames     (2 questionable structures)
Bacillus anthracis str. CDC 684     (1 questionable structure)
Bacillus anthracis str. H9401     (1 CRISPR, 1 questionable structure)
Bacillus anthracis str. Sterne     (2 questionable structures)
Bacillus atrophaeus 1942
Bacillus cellulosilyticus DSM 2522     (5 questionable structures)
Bacillus cereus 03BB102     (1 questionable structure)
Bacillus cereus AH187
Bacillus cereus AH820     (1 questionable structure)
Bacillus cereus ATCC 10987     (1 questionable structure)
Bacillus cereus ATCC 14579     (1 questionable structure)
Bacillus cereus B4264     (1 questionable structure)
Bacillus cereus biovar anthracis str. CI     (1 questionable structure)
Bacillus cereus E33L     (1 questionable structure)
Bacillus cereus F837/76     (1 CRISPR, 3 questionable structures)
Bacillus cereus FRI-35     (2 CRISPRs, 1 questionable structure)
Bacillus cereus G9842     (2 questionable structures)
Bacillus cereus NC7401     (1 questionable structure)
Bacillus cereus Q1
Bacillus cereus subsp. cytotoxis NVH 391-98     (2 CRISPRs, 1 questionable structure)
Bacillus clausii KSM-K16     (8 CRISPRs, 1 questionable structure)
Bacillus coagulans 2-6     (2 CRISPRs, 1 questionable structure)
Bacillus coagulans 36D1     (4 CRISPRs, 7 questionable structures)
Bacillus halodurans C-125     (5 CRISPRs)
Bacillus infantis NRRL B-14911     (5 questionable structures)
Bacillus licheniformis 9945A
Bacillus licheniformis ATCC 14580
Bacillus megaterium DSM319     (2 questionable structures)
Bacillus megaterium QM B1551     (2 questionable structures)
Bacillus megaterium WSH-002     (2 questionable structures)
Bacillus pseudofirmus OF4     (2 questionable structures)
Bacillus pumilus SAFR-032
Bacillus selenitireducens MLS10
Bacillus sp. 1NLA3E     (3 questionable structures)
Bacillus sp. JS
Bacillus subtilis BEST7613
Bacillus subtilis BSn5
Bacillus subtilis PY79
Bacillus subtilis QB928
Bacillus subtilis subsp. natto BEST195
Bacillus subtilis subsp. spizizenii str. W23
Bacillus subtilis subsp. spizizenii TU-B-10
Bacillus subtilis subsp. subtilis 6051-HGW
Bacillus subtilis subsp. subtilis RO-NN-1
Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. BAB-1
Bacillus subtilis subsp. subtilis str. BSP1
Bacillus subtilis XF-1
Bacillus thuringiensis BMB171     (1 questionable structure)
Bacillus thuringiensis Bt407     (1 questionable structure)
Bacillus thuringiensis HD-771     (4 questionable structures)
Bacillus thuringiensis HD-789     (4 questionable structures)
Bacillus thuringiensis MC28     (3 questionable structures)
Bacillus thuringiensis serovar chinensis CT-43     (2 CRISPRs, 1 questionable structure)
Bacillus thuringiensis serovar finitimus YBT-020     (1 questionable structure)
Bacillus thuringiensis serovar konkukian str. 97-27     (1 questionable structure)
Bacillus thuringiensis serovar kurstaki str. HD73     (2 questionable structures)
Bacillus thuringiensis serovar thuringiensis str. IS5056     (2 CRISPRs, 1 questionable structure)
Bacillus thuringiensis str. Al Hakam     (1 CRISPR, 4 questionable structures)
Bacillus thuringiensis YBT-1518     (2 questionable structures)
Bacillus toyonensis BCT-7112     (3 questionable structures)
Bacillus tusciae DSM 2912     (4 CRISPRs, 1 questionable structure)
Bacillus weihenstephanensis KBAB4     (2 questionable structures)
Bacteriovorax marinus SJ
Bacteroides fragilis 638R     (1 CRISPR)
Bacteroides fragilis NCTC 9343     (2 CRISPRs, 2 questionable structures)
Bacteroides fragilis YCH46     (1 CRISPR)
Bacteroides helcogenes P 36-108     (1 CRISPR)
Bacteroides salanitronis DSM 18170     (2 questionable structures)
Bacteroides sp. CF50     (1 CRISPR)
Bacteroides thetaiotaomicron VPI-5482     (1 questionable structure)
Bacteroides uniformis
Bacteroides vulgatus ATCC 8482
Bacteroides xylanisolvens XB1A     (1 questionable structure)
Bartonella australis Aust/NH1
Bartonella bacilliformis KC583
Bartonella clarridgeiae 73     (1 questionable structure)
Bartonella grahamii as4aup     (1 questionable structure)
Bartonella henselae str. Houston-1
Bartonella quintana RM-11
Bartonella quintana str. Toulouse
Bartonella tribocorum CIP 105476     (1 questionable structure)
Bartonella vinsonii subsp. berkhoffii str. Winnie
Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
Bdellovibrio bacteriovorus HD100
Bdellovibrio bacteriovorus str. Tiberius     (1 questionable structure)
Bdellovibrio exovorus JSS     (1 CRISPR)
Beijerinckia indica subsp. indica ATCC 9039
Belliella baltica DSM 15883     (1 CRISPR)
beta proteobacterium CB
Beutenbergia cavernae DSM 12333
Bibersteinia trehalosi USDA-ARS-USMARC-192     (4 CRISPRs, 1 questionable structure)
Bifidobacterium adolescentis ATCC 15703     (2 CRISPRs, 3 questionable structures)
Bifidobacterium animalis subsp. animalis ATCC 25527     (2 CRISPRs, 1 questionable structure)
Bifidobacterium animalis subsp. lactis AD011     (1 CRISPR, 3 questionable structures)
Bifidobacterium animalis subsp. lactis ATCC 27673     (2 CRISPRs, 2 questionable structures)
Bifidobacterium animalis subsp. lactis B420     (2 CRISPRs, 1 questionable structure)
Bifidobacterium animalis subsp. lactis BB-12     (1 CRISPR, 1 questionable structure)
Bifidobacterium animalis subsp. lactis Bi-07     (2 CRISPRs, 1 questionable structure)
Bifidobacterium animalis subsp. lactis Bl-04     (1 CRISPR, 1 questionable structure)
Bifidobacterium animalis subsp. lactis Bl12     (1 CRISPR, 1 questionable structure)
Bifidobacterium animalis subsp. lactis BLC1     (1 CRISPR, 1 questionable structure)
Bifidobacterium animalis subsp. lactis CNCM I-2494     (1 CRISPR, 1 questionable structure)
Bifidobacterium animalis subsp. lactis DSM 10140     (1 CRISPR, 2 questionable structures)
Bifidobacterium animalis subsp. lactis V9     (1 CRISPR, 1 questionable structure)
Bifidobacterium asteroides PRL2011     (1 CRISPR)
Bifidobacterium bifidum BGN4
Bifidobacterium bifidum PRL2010     (2 questionable structures)
Bifidobacterium bifidum S17     (1 CRISPR, 2 questionable structures)
Bifidobacterium breve ACS-071-V-Sch8b     (3 CRISPRs, 4 questionable structures)
Bifidobacterium breve UCC2003     (2 CRISPRs, 2 questionable structures)
Bifidobacterium dentium Bd1     (2 CRISPRs, 7 questionable structures)
Bifidobacterium longum DJO10A     (1 CRISPR, 1 questionable structure)
Bifidobacterium longum NCC2705     (1 questionable structure)
Bifidobacterium longum subsp. infantis 157F     (2 questionable structures)
Bifidobacterium longum subsp. infantis ATCC 15697     (2 questionable structures)
Bifidobacterium longum subsp. longum BBMN68     (4 CRISPRs, 1 questionable structure)
Bifidobacterium longum subsp. longum F8     (1 questionable structure)
Bifidobacterium longum subsp. longum JCM 1217     (1 questionable structure)
Bifidobacterium longum subsp. longum JDM301     (2 questionable structures)
Bifidobacterium longum subsp. longum KACC 91563     (1 CRISPR, 2 questionable structures)
Bifidobacterium thermophilum RBL67     (13 CRISPRs, 4 questionable structures)
Blastococcus saxobsidens DD2     (1 CRISPR)
Blattabacterium sp. (Blaberus giganteus)
Blattabacterium sp. (Blatta orientalis) str. Tarazona
Blattabacterium sp. (Blattella germanica) str. Bge
Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu
Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR
Blattabacterium sp. (Nauphoeta cinerea)
Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA
Blattabacterium sp. (Periplaneta americana) str. BPLAN
Bordetella avium 197N
Bordetella bronchiseptica 253     (3 questionable structures)
Bordetella bronchiseptica MO149     (1 questionable structure)
Bordetella bronchiseptica RB50     (2 questionable structures)
Bordetella parapertussis
Bordetella parapertussis 12822     (2 questionable structures)
Bordetella parapertussis Bpp5     (3 questionable structures)
Bordetella pertussis 18323     (1 questionable structure)
Bordetella pertussis CS     (1 questionable structure)
Bordetella pertussis Tohama I     (1 questionable structure)
Bordetella petrii DSM 12804
Borrelia afzelii HLJ01
Borrelia afzelii PKo
Borrelia bissettii DN127
Borrelia burgdorferi B31
Borrelia burgdorferi CA382
Borrelia burgdorferi JD1
Borrelia burgdorferi N40
Borrelia burgdorferi ZS7
Borrelia crocidurae str. Achema     (1 questionable structure)
Borrelia duttonii Ly
Borrelia garinii BgVir
Borrelia garinii NMJW1
Borrelia garinii PBi
Borrelia hermsii DAH
Borrelia miyamotoi LB-2001
Borrelia recurrentis A1
Borrelia turicatae 91E135
Borrelia valaisiana VS116
Brachybacterium faecium DSM 4810     (1 questionable structure)
Brachyspira hyodysenteriae WA1     (2 questionable structures)
Brachyspira intermedia PWS/A     (6 questionable structures)
Brachyspira murdochii DSM 12563     (1 CRISPR, 2 questionable structures)
Brachyspira pilosicoli 95/1000
Brachyspira pilosicoli B2904     (1 questionable structure)
Brachyspira pilosicoli P43/6/78
Brachyspira pilosicoli WesB
Bradyrhizobium japonicum USDA 110
Bradyrhizobium japonicum USDA 6
Bradyrhizobium sp. BTAi1     (1 questionable structure)
Bradyrhizobium sp. ORS278     (1 questionable structure)
Bradyrhizobium sp. S23321     (1 questionable structure)
Brevibacillus brevis NBRC 100599
Brevundimonas subvibrioides ATCC 15264
Brucella abortus A13334
Brucella abortus biovar 1 str. 9-941
Brucella abortus S19
Brucella canis ATCC 23365
Brucella canis HSK A52141
Brucella ceti TE10759-12     (3 questionable structures)
Brucella ceti TE28753-12     (1 questionable structure)
Brucella melitensis 16M     (1 questionable structure)
Brucella melitensis ATCC 23457     (1 questionable structure)
Brucella melitensis biovar Abortus 2308
Brucella melitensis M28     (1 questionable structure)
Brucella melitensis M5-90     (1 questionable structure)
Brucella melitensis NI     (1 questionable structure)
Brucella microti CCM 4915     (1 questionable structure)
Brucella ovis ATCC 25840
Brucella pinnipedialis B2/94     (1 questionable structure)
Brucella suis 1330
Brucella suis ATCC 23445
Brucella suis VBI22
Buchnera aphidicola (Cinara cedri)
Buchnera aphidicola (Cinara tujafilina)
Buchnera aphidicola str. 5A (Acyrthosiphon pisum)
Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)
Buchnera aphidicola str. APS (Acyrthosiphon pisum)
Buchnera aphidicola str. Bp (Baizongia pistaciae)
Buchnera aphidicola str. Cc (Cinara cedri)
Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)
Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)     (1 questionable structure)
Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)
Buchnera aphidicola str. Sg (Schizaphis graminum)
Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)
Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)
Buchnera aphidicola str. Ua (Uroleucon ambrosiae)
Burkholderia ambifaria MC40-6     (3 questionable structures)
Burkholderia cenocepacia AU 1054
Burkholderia cenocepacia HI2424
Burkholderia cenocepacia J2315
Burkholderia cenocepacia MC0-3
Burkholderia cepacia AMMD     (1 CRISPR, 2 questionable structures)
Burkholderia cepacia GG4     (2 questionable structures)
Burkholderia gladioli BSR3
Burkholderia glumae BGR1     (1 questionable structure)
Burkholderia mallei ATCC 23344
Burkholderia mallei NCTC 10229
Burkholderia mallei NCTC 10247
Burkholderia mallei SAVP1
Burkholderia multivorans ATCC 17616
Burkholderia phenoliruptrix BR3459a
Burkholderia phymatum STM815
Burkholderia phytofirmans PsJN     (1 questionable structure)
Burkholderia pseudomallei 1026b
Burkholderia pseudomallei 1106a     (1 questionable structure)
Burkholderia pseudomallei 1710b     (1 questionable structure)
Burkholderia pseudomallei 668
Burkholderia pseudomallei BPC006
Burkholderia pseudomallei K96243     (3 questionable structures)
Burkholderia pseudomallei MSHR305     (2 questionable structures)
Burkholderia pseudomallei MSHR346
Burkholderia pseudomallei NCTC 13179     (1 questionable structure)
Burkholderia rhizoxinica HKI 454
Burkholderia sp. 383     (2 questionable structures)
Burkholderia sp. CCGE1001
Burkholderia sp. CCGE1002
Burkholderia sp. CCGE1003     (2 questionable structures)
Burkholderia sp. KJ006     (2 questionable structures)
Burkholderia sp. RPE64     (2 CRISPRs)
Burkholderia sp. YI23     (4 CRISPRs, 3 questionable structures)
Burkholderia thailandensis E264
Burkholderia thailandensis MSMB121     (1 questionable structure)
Burkholderia vietnamiensis G4
Burkholderia xenovorans LB400     (4 questionable structures)
butyrate-producing bacterium SM4/1     (1 questionable structure)
butyrate-producing bacterium SS3/4     (3 questionable structures)
butyrate-producing bacterium SSC/2
Butyrivibrio fibrisolvens 16/4     (1 CRISPR)
Butyrivibrio proteoclasticus B316
Caldicellulosiruptor hydrothermalis 108     (6 CRISPRs)
Caldicellulosiruptor kristjanssonii 177R1B     (14 CRISPRs)
Caldicellulosiruptor kronotskyensis 2002     (8 CRISPRs)
Caldicellulosiruptor lactoaceticus 6A     (12 CRISPRs)
Caldicellulosiruptor obsidiansis OB47     (10 CRISPRs)
Caldicellulosiruptor owensensis OL     (3 CRISPRs)
Caldicellulosiruptor saccharolyticus DSM 8903     (13 CRISPRs)
Caldilinea aerophila DSM 14535 = NBRC 104270     (4 CRISPRs, 6 questionable structures)
Caldisericum exile AZM16c01     (1 CRISPR)
Calditerrivibrio nitroreducens DSM 19672     (4 CRISPRs)
Calothrix sp. PCC 6303     (7 CRISPRs, 5 questionable structures)
Calothrix sp. PCC 7507     (10 CRISPRs, 8 questionable structures)
Campylobacter coli 15-537360
Campylobacter coli 76339     (1 CRISPR)
Campylobacter coli CVM N29710
Campylobacter concisus 13826     (1 questionable structure)
Campylobacter curvus 525.92     (2 CRISPRs, 1 questionable structure)
Campylobacter fetus subsp. fetus 82-40     (2 CRISPRs)
Campylobacter hominis ATCC BAA-381     (1 CRISPR)
Campylobacter jejuni 32488     (1 CRISPR)
Campylobacter jejuni 4031     (1 CRISPR, 1 questionable structure)
Campylobacter jejuni RM1221     (1 CRISPR, 1 questionable structure)
Campylobacter jejuni subsp. doylei 269.97     (1 CRISPR, 1 questionable structure)
Campylobacter jejuni subsp. jejuni 00-2425     (1 questionable structure)
Campylobacter jejuni subsp. jejuni 00-2426     (1 questionable structure)
Campylobacter jejuni subsp. jejuni 00-2538     (1 questionable structure)
Campylobacter jejuni subsp. jejuni 00-2544     (1 CRISPR, 1 questionable structure)
Campylobacter jejuni subsp. jejuni 81-176
Campylobacter jejuni subsp. jejuni 81116     (1 CRISPR, 1 questionable structure)
Campylobacter jejuni subsp. jejuni IA3902     (1 CRISPR, 1 questionable structure)
Campylobacter jejuni subsp. jejuni ICDCCJ07001     (1 CRISPR, 2 questionable structures)
Campylobacter jejuni subsp. jejuni M1     (1 CRISPR, 1 questionable structure)
Campylobacter jejuni subsp. jejuni NCTC 11168     (1 CRISPR, 1 questionable structure)
Campylobacter jejuni subsp. jejuni NCTC 11168-BN148     (1 CRISPR, 1 questionable structure)
Campylobacter jejuni subsp. jejuni PT14     (1 CRISPR, 1 questionable structure)
Campylobacter jejuni subsp. jejuni S3     (1 CRISPR, 1 questionable structure)
Campylobacter lari RM2100
Campylobacter sp. 03-427     (3 CRISPRs)
candidate division SR1 bacterium RAAC1_SR1_1     (4 CRISPRs)
candidate division WWE3 bacterium RAAC2_WWE3_1
Candidatus Accumulibacter phosphatis clade IIA str. UW-1     (2 CRISPRs)
Candidatus Amoebophilus asiaticus 5a2     (4 questionable structures)
Candidatus Arthromitus sp. SFB-mouse-Japan     (3 CRISPRs)
Candidatus Arthromitus sp. SFB-mouse-Yit     (3 CRISPRs)
Candidatus Arthromitus sp. SFB-rat-Yit     (1 CRISPR)
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2
Candidatus Blochmannia chromaiodes str. 640
Candidatus Blochmannia floridanus
Candidatus Blochmannia pennsylvanicus str. BPEN
Candidatus Blochmannia vafer str. BVAF
Candidatus Caldiarchaeum subterraneum     (5 CRISPRs)
Candidatus Carsonella ruddii CE isolate Thao2000
Candidatus Carsonella ruddii CS isolate Thao2000
Candidatus Carsonella ruddii DC
Candidatus Carsonella ruddii HC isolate Thao2000
Candidatus Carsonella ruddii HT isolate Thao2000
Candidatus Carsonella ruddii PC isolate NHV
Candidatus Carsonella ruddii PV
Candidatus Chloracidobacterium thermophilum B     (3 CRISPRs, 1 questionable structure)
Candidatus Cloacamonas acidaminovorans str. Evry     (4 CRISPRs, 9 questionable structures)
Candidatus Desulfococcus oleovorans Hxd3     (2 CRISPRs, 4 questionable structures)
Candidatus Desulforudis audaxviator MP104C     (4 CRISPRs, 2 questionable structures)
Candidatus Endolissoclinum patella L2
Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)     (1 questionable structure)
Candidatus Hodgkinia cicadicola Dsem
Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis)
Candidatus Kinetoplastibacterium blastocrithidii TCC012E
Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255)
Candidatus Kinetoplastibacterium crithidii TCC036E
Candidatus Kinetoplastibacterium desouzaii TCC079E
Candidatus Kinetoplastibacterium galatii TCC219
Candidatus Kinetoplastibacterium oncopeltii TCC290E
Candidatus Liberibacter americanus str. Sao Paulo
Candidatus Liberibacter asiaticus str. gxpsy     (1 questionable structure)
Candidatus Liberibacter asiaticus str. psy62
Candidatus Liberibacter solanacearum CLso-ZC1     (1 questionable structure)
Candidatus Methanomethylophilus alvus Mx1201     (2 CRISPRs, 1 questionable structure)
Candidatus Methylomirabilis oxyfera     (1 CRISPR, 1 questionable structure)
Candidatus Midichloria mitochondrii IricVA
Candidatus Moranella endobia PCIT
Candidatus Moranella endobia PCVAL
Candidatus Mycoplasma haemolamae str. Purdue     (1 questionable structure)
Candidatus Mycoplasma haemominutum 'Birmingham 1'
Candidatus Nasuia deltocephalinicola str. NAS-ALF
Candidatus Nitrosopumilus koreensis AR1     (1 questionable structure)
Candidatus Nitrosopumilus sp. AR2
Candidatus Nitrososphaera gargensis Ga9.2     (1 CRISPR)
Candidatus Nitrospira defluvii     (1 CRISPR)
Candidatus Pelagibacter sp. IMCC9063
Candidatus Pelagibacter ubique HTCC1062
Candidatus Phytoplasma australiense     (1 questionable structure)
Candidatus Phytoplasma mali
Candidatus Phytoplasma solani
Candidatus Portiera aleyrodidarum BT-B     (2 questionable structures)
Candidatus Portiera aleyrodidarum BT-QVLC     (2 questionable structures)
Candidatus Portiera aleyrodidarum TV     (1 questionable structure)
Candidatus Profftella armatura
Candidatus Protochlamydia amoebophila UWE25     (1 questionable structure)
Candidatus Puniceispirillum marinum IMCC1322     (2 CRISPRs)
Candidatus Rickettsia amblyommii str. GAT-30V     (1 questionable structure)
Candidatus Riesia pediculicola USDA
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)
Candidatus Saccharibacteria bacterium RAAC3_TM7_1
Candidatus Saccharimonas aalborgensis
Candidatus Sulcia muelleri CARI
Candidatus Sulcia muelleri DMIN
Candidatus Sulcia muelleri GWSS     (1 questionable structure)
Candidatus Sulcia muelleri SMDSEM
Candidatus Sulcia muelleri str. Sulcia-ALF
Candidatus Symbiobacter mobilis CR     (4 CRISPRs, 1 questionable structure)
Candidatus Tremblaya phenacola PAVE
Candidatus Tremblaya princeps PCIT
Candidatus Tremblaya princeps PCVAL
Candidatus Uzinura diaspidicola str. ASNER
Candidatus Vesicomyosocius okutanii HA
Candidatus Zinderia insecticola CARI
Capnocytophaga canimorsus Cc5     (2 CRISPRs)
Capnocytophaga ochracea DSM 7271     (1 CRISPR, 5 questionable structures)
Carboxydothermus hydrogenoformans Z-2901     (2 CRISPRs, 1 questionable structure)
Cardinium endosymbiont cEper1 of Encarsia pergandiella
Carnobacterium maltaromaticum LMA28     (2 questionable structures)
Carnobacterium sp. 17-4
Carnobacterium sp. WN1359     (2 questionable structures)
Catenulispora acidiphila DSM 44928     (6 CRISPRs, 4 questionable structures)
Caulobacter crescentus CB15     (1 questionable structure)
Caulobacter crescentus NA1000
Caulobacter segnis ATCC 21756     (1 questionable structure)
Caulobacter sp. K31     (1 questionable structure)
Cellulomonas fimi ATCC 484     (1 CRISPR, 1 questionable structure)
Cellulomonas flavigena DSM 20109     (2 questionable structures)
Cellulophaga algicola DSM 14237     (1 questionable structure)
Cellulophaga lytica DSM 7489     (2 questionable structures)
Cellvibrio gilvus ATCC 13127     (1 questionable structure)
Cellvibrio japonicus Ueda107     (1 CRISPR, 1 questionable structure)
Chamaesiphon minutus PCC 6605     (2 CRISPRs, 13 questionable structures)
Chitinophaga pinensis DSM 2588     (2 questionable structures)
Chlamydia muridarum Nigg
Chlamydia pecorum P787
Chlamydia pecorum PV3056/3
Chlamydia pecorum W73
Chlamydia phage CPAR39
Chlamydia psittaci 01DC12
Chlamydia psittaci 84/55
Chlamydia psittaci CP3
Chlamydia psittaci GR9
Chlamydia psittaci M56
Chlamydia psittaci MN
Chlamydia psittaci NJ1
Chlamydia psittaci VS225
Chlamydia psittaci WC
Chlamydia psittaci WS/RT/E30
Chlamydia trachomatis     (1 questionable structure)
Chlamydia trachomatis 434/Bu
Chlamydia trachomatis A/363
Chlamydia trachomatis A/5291
Chlamydia trachomatis A/7249
Chlamydia trachomatis A/HAR-13
Chlamydia trachomatis A2497
Chlamydia trachomatis B/Jali20/OT
Chlamydia trachomatis B/TZ1A828/OT
Chlamydia trachomatis C/TW-3
Chlamydia trachomatis D-EC
Chlamydia trachomatis D-LC
Chlamydia trachomatis D/SotonD1
Chlamydia trachomatis D/SotonD5
Chlamydia trachomatis D/SotonD6
Chlamydia trachomatis D/UW-3/CX
Chlamydia trachomatis E/11023
Chlamydia trachomatis E/150
Chlamydia trachomatis E/Bour
Chlamydia trachomatis E/SotonE4
Chlamydia trachomatis E/SotonE8
Chlamydia trachomatis E/SW3
Chlamydia trachomatis F/11-96
Chlamydia trachomatis F/SotonF3
Chlamydia trachomatis F/SW4
Chlamydia trachomatis F/SW5
Chlamydia trachomatis G/11074
Chlamydia trachomatis G/11222
Chlamydia trachomatis G/9301
Chlamydia trachomatis G/9768
Chlamydia trachomatis G/SotonG1
Chlamydia trachomatis Ia/SotonIa1
Chlamydia trachomatis Ia/SotonIa3
Chlamydia trachomatis IU824
Chlamydia trachomatis IU888
Chlamydia trachomatis J/6276tet1
Chlamydia trachomatis K/SotonK1
Chlamydia trachomatis L1/115
Chlamydia trachomatis L1/1322/p2
Chlamydia trachomatis L1/224
Chlamydia trachomatis L1/440/LN
Chlamydia trachomatis L2/25667R
Chlamydia trachomatis L2/434/Bu(f)
Chlamydia trachomatis L2/434/Bu(i)
Chlamydia trachomatis L2b/795
Chlamydia trachomatis L2b/8200/07
Chlamydia trachomatis L2b/Ams1
Chlamydia trachomatis L2b/Ams2
Chlamydia trachomatis L2b/Ams3
Chlamydia trachomatis L2b/Ams4
Chlamydia trachomatis L2b/Ams5
Chlamydia trachomatis L2b/Canada1
Chlamydia trachomatis L2b/Canada2
Chlamydia trachomatis L2b/CV204
Chlamydia trachomatis L2b/LST
Chlamydia trachomatis L2b/UCH-1/proctitis
Chlamydia trachomatis L2b/UCH-2
Chlamydia trachomatis L2c
Chlamydia trachomatis L3/404/LN
Chlamydia trachomatis RC-F(s)/342
Chlamydia trachomatis RC-F(s)/852
Chlamydia trachomatis RC-F/69
Chlamydia trachomatis RC-J(s)/122
Chlamydia trachomatis RC-J/943
Chlamydia trachomatis RC-J/953
Chlamydia trachomatis RC-J/966
Chlamydia trachomatis RC-J/971
Chlamydia trachomatis RC-L2(s)/3
Chlamydia trachomatis RC-L2(s)/46
Chlamydia trachomatis RC-L2/55
Chlamydia trachomatis Sweden2
Chlamydophila abortus S26/3
Chlamydophila caviae GPIC
Chlamydophila felis Fe/C-56
Chlamydophila pecorum E58
Chlamydophila pneumoniae AR39
Chlamydophila pneumoniae CWL029
Chlamydophila pneumoniae J138
Chlamydophila pneumoniae LPCoLN
Chlamydophila pneumoniae TW-183
Chlamydophila psittaci 01DC11
Chlamydophila psittaci 02DC15
Chlamydophila psittaci 08DC60
Chlamydophila psittaci 6BC
Chlamydophila psittaci C19/98
Chlamydophila psittaci Mat116
Chlamydophila psittaci RD1
Chlorobaculum parvum NCIB 8327     (1 CRISPR, 2 questionable structures)
Chlorobium chlorochromatii CaD3     (2 CRISPRs)
Chlorobium limicola DSM 245     (4 CRISPRs, 3 questionable structures)
Chlorobium phaeobacteroides BS1     (4 CRISPRs, 2 questionable structures)
Chlorobium phaeobacteroides DSM 266     (5 CRISPRs, 1 questionable structure)
Chlorobium tepidum TLS     (2 CRISPRs, 2 questionable structures)
Chloroflexus aggregans DSM 9485     (3 CRISPRs, 21 questionable structures)
Chloroflexus aurantiacus J-10-fl     (3 CRISPRs, 5 questionable structures)
Chloroflexus sp. Y-400-fl     (4 CRISPRs, 5 questionable structures)
Chloroherpeton thalassium ATCC 35110     (2 CRISPRs, 3 questionable structures)
Chromobacterium violaceum ATCC 12472     (4 CRISPRs)
Chromohalobacter salexigens DSM 3043     (2 CRISPRs)
Chroococcidiopsis thermalis PCC 7203     (2 CRISPRs, 8 questionable structures)
Chthonomonas calidirosea T49     (1 questionable structure)
Citrobacter koseri ATCC BAA-895     (1 CRISPR, 5 questionable structures)
Citrobacter rodentium ICC168     (2 CRISPRs, 16 questionable structures)
Clavibacter michiganensis subsp. michiganensis NCPPB 382     (1 questionable structure)
Clavibacter michiganensis subsp. nebraskensis NCPPB 2581
Clavibacter michiganensis subsp. sepedonicus
Clostridiales genomosp. BVAB3 str. UPII9-5     (1 questionable structure)
Clostridium acetobutylicum ATCC 824     (2 questionable structures)
Clostridium acetobutylicum DSM 1731     (2 questionable structures)
Clostridium acetobutylicum EA 2018     (2 questionable structures)
Clostridium acidurici 9a     (3 CRISPRs)
Clostridium autoethanogenum DSM 10061     (3 CRISPRs)
Clostridium beijerinckii NCIMB 8052     (2 questionable structures)
Clostridium botulinum A str. ATCC 19397 "Hall"     (8 CRISPRs, 2 questionable structures)
Clostridium botulinum A str. ATCC 3502     (8 CRISPRs)
Clostridium botulinum A str. Hall     (8 CRISPRs, 2 questionable structures)
Clostridium botulinum A2 str. Kyoto     (6 CRISPRs)
Clostridium botulinum A3 str. Loch Maree     (5 CRISPRs, 2 questionable structures)
Clostridium botulinum B str. Eklund 17B     (1 CRISPR)
Clostridium botulinum B str. Eklund 17B(NRP)     (1 CRISPR, 1 questionable structure)
Clostridium botulinum B1 str. Okra     (9 CRISPRs)
Clostridium botulinum Ba4 str. 657     (7 CRISPRs)
Clostridium botulinum BKT015925     (6 CRISPRs)
Clostridium botulinum E3 str. Alaska E43     (3 CRISPRs, 1 questionable structure)
Clostridium botulinum F str. 230613     (13 CRISPRs)
Clostridium botulinum F str. Langeland     (12 CRISPRs, 1 questionable structure)
Clostridium botulinum H04402 065     (8 CRISPRs)
Clostridium cellulolyticum H10     (3 CRISPRs)
Clostridium cellulovorans 743B     (1 CRISPR, 1 questionable structure)
Clostridium cf. saccharolyticum K10     (1 CRISPR, 3 questionable structures)
Clostridium clariflavum DSM 19732     (3 CRISPRs)
Clostridium difficile 2007855     (18 CRISPRs, 1 questionable structure)
Clostridium difficile 630     (12 CRISPRs, 3 questionable structures)
Clostridium difficile BI1     (34 CRISPRs, 1 questionable structure)
Clostridium difficile BI9     (14 CRISPRs, 1 questionable structure)
Clostridium difficile CD196     (13 CRISPRs, 5 questionable structures)
Clostridium difficile CF5     (15 CRISPRs, 1 questionable structure)
Clostridium difficile M120     (6 CRISPRs, 2 questionable structures)
Clostridium difficile M68     (13 CRISPRs, 6 questionable structures)
Clostridium difficile R20291     (13 CRISPRs, 5 questionable structures)
Clostridium kluyveri DSM 555     (5 CRISPRs)
Clostridium kluyveri NBRC 12016     (5 CRISPRs)
Clostridium lentocellum DSM 5427
Clostridium ljungdahlii
Clostridium novyi NT     (2 CRISPRs, 2 questionable structures)
Clostridium pasteurianum BC1     (1 CRISPR)
Clostridium perfringens ATCC 13124     (2 CRISPRs)
Clostridium perfringens SM101     (2 CRISPRs)
Clostridium perfringens str. 13     (2 questionable structures)
Clostridium phage phiSM101
Clostridium phytofermentans ISDg     (3 questionable structures)
Clostridium saccharobutylicum DSM 13864     (2 CRISPRs, 2 questionable structures)
Clostridium saccharolyticum WM1     (1 CRISPR, 7 questionable structures)
Clostridium saccharoperbutylacetonicum N1-4(HMT)     (4 CRISPRs, 6 questionable structures)
Clostridium sp. BNL1100     (1 CRISPR, 1 questionable structure)
Clostridium sp. SY8519     (3 CRISPRs, 2 questionable structures)
Clostridium stercorarium subsp. stercorarium DSM 8532     (20 CRISPRs)
Clostridium sticklandii DSM 519     (1 questionable structure)
Clostridium tetani 12124569     (8 CRISPRs)
Clostridium tetani E88     (8 CRISPRs)
Clostridium thermocellum ATCC 27405     (5 CRISPRs)
Clostridium thermocellum DSM 1313     (5 CRISPRs)
Collimonas fungivorans Ter331
Colwellia psychrerythraea 34H     (1 questionable structure)
Comamonas sp. CNB-1
Comamonas testosteroni CNB-2     (2 questionable structures)
Conexibacter woesei DSM 14684     (3 questionable structures)
Coprococcus catus GD/7     (2 CRISPRs, 1 questionable structure)
Coprococcus sp. ART55/1     (1 CRISPR)
Coprothermobacter proteolyticus DSM 5265     (1 CRISPR, 2 questionable structures)
Coraliomargarita akajimensis DSM 45221     (4 questionable structures)
Corallococcus coralloides DSM 2259     (7 CRISPRs, 9 questionable structures)
Coriobacterium glomerans PW2     (2 CRISPRs)
Corynebacterium argentoratense DSM 44202
Corynebacterium aurimucosum
Corynebacterium aurimucosum ATCC 700975     (1 CRISPR)
Corynebacterium callunae DSM 20147     (1 questionable structure)
Corynebacterium diphtheriae 241     (2 CRISPRs, 1 questionable structure)
Corynebacterium diphtheriae 31A     (1 CRISPR, 1 questionable structure)
Corynebacterium diphtheriae BH8     (1 CRISPR, 1 questionable structure)
Corynebacterium diphtheriae C7 (beta)     (1 CRISPR, 1 questionable structure)
Corynebacterium diphtheriae CDCE 8392     (1 CRISPR, 1 questionable structure)
Corynebacterium diphtheriae HC01     (2 CRISPRs, 1 questionable structure)
Corynebacterium diphtheriae HC02     (1 CRISPR)
Corynebacterium diphtheriae HC03     (1 CRISPR, 1 questionable structure)
Corynebacterium diphtheriae HC04     (1 CRISPR, 1 questionable structure)
Corynebacterium diphtheriae INCA 402     (1 CRISPR)
Corynebacterium diphtheriae NCTC 13129     (2 CRISPRs)
Corynebacterium diphtheriae PW8     (1 CRISPR)
Corynebacterium diphtheriae VA01     (1 CRISPR, 2 questionable structures)
Corynebacterium efficiens YS-314     (1 CRISPR, 1 questionable structure)
Corynebacterium glutamicum ATCC 13032     (2 questionable structures)
Corynebacterium glutamicum K051     (1 questionable structure)
Corynebacterium glutamicum MB001     (1 questionable structure)
Corynebacterium glutamicum R     (1 CRISPR)
Corynebacterium glutamicum SCgG1
Corynebacterium glutamicum SCgG2
Corynebacterium halotolerans YIM 70093 = DSM 44683     (2 questionable structures)
Corynebacterium jeikeium K411     (1 CRISPR, 1 questionable structure)
Corynebacterium kroppenstedtii DSM 44385
Corynebacterium maris DSM 45190     (1 questionable structure)
Corynebacterium pseudotuberculosis 1/06-A     (1 CRISPR, 1 questionable structure)
Corynebacterium pseudotuberculosis 1002     (1 CRISPR)
Corynebacterium pseudotuberculosis 258     (1 questionable structure)
Corynebacterium pseudotuberculosis 267     (1 CRISPR)
Corynebacterium pseudotuberculosis 3/99-5     (1 CRISPR)
Corynebacterium pseudotuberculosis 31
Corynebacterium pseudotuberculosis 316
Corynebacterium pseudotuberculosis 42/02-A     (1 CRISPR)
Corynebacterium pseudotuberculosis C231     (1 CRISPR)
Corynebacterium pseudotuberculosis CIP 52.97
Corynebacterium pseudotuberculosis Cp162
Corynebacterium pseudotuberculosis FRC41     (1 CRISPR)
Corynebacterium pseudotuberculosis I19     (1 CRISPR)
Corynebacterium pseudotuberculosis P54B96     (1 CRISPR)
Corynebacterium pseudotuberculosis PAT10     (1 CRISPR)
Corynebacterium resistens DSM 45100     (2 CRISPRs, 3 questionable structures)
Corynebacterium terpenotabidum Y-11     (3 CRISPRs)
Corynebacterium ulcerans 0102     (3 CRISPRs)
Corynebacterium ulcerans 809     (3 CRISPRs)
Corynebacterium ulcerans BR-AD22     (3 CRISPRs)
Corynebacterium urealyticum DSM 7109     (2 CRISPRs, 1 questionable structure)
Corynebacterium urealyticum DSM 7111     (1 CRISPR, 1 questionable structure)
Corynebacterium variabile DSM 44702
Coxiella burnetii CbuG_Q212
Coxiella burnetii CbuK_Q154     (1 questionable structure)
Coxiella burnetii Dugway 5J108-111
Coxiella burnetii RSA 331     (1 questionable structure)
Coxiella burnetii RSA 493
Crinalium epipsammum PCC 9333     (8 CRISPRs, 4 questionable structures)
Croceibacter atlanticus HTCC2559     (1 questionable structure)
Cronobacter sakazakii CMCC 45402     (2 CRISPRs, 6 questionable structures)
Cronobacter sakazakii ES15     (3 CRISPRs, 7 questionable structures)
Cronobacter sakazakii SP291     (3 CRISPRs, 10 questionable structures)
Cronobacter turicensis     (2 CRISPRs, 6 questionable structures)
Cryptobacterium curtum DSM 15641     (1 questionable structure)
Cupriavidus necator N-1
Cupriavidus taiwanensis     (1 questionable structure)
Cyanobacterium aponinum PCC 10605     (10 CRISPRs)
Cyanobacterium stanieri PCC 7202     (2 CRISPRs)
cyanobacterium UCYN-A
Cyanobium gracile PCC 6307
Cyanothece sp. ATCC 51142     (5 CRISPRs, 2 questionable structures)
Cyanothece sp. PCC 7424     (14 CRISPRs, 9 questionable structures)
Cyanothece sp. PCC 7425     (5 CRISPRs)
Cyanothece sp. PCC 7822     (8 CRISPRs, 4 questionable structures)
Cyanothece sp. PCC 8801     (6 CRISPRs, 5 questionable structures)
Cyanothece sp. PCC 8802     (8 CRISPRs, 4 questionable structures)
Cyclobacterium marinum DSM 745
Cycloclasticus sp. P1
Cycloclasticus zancles 7-ME     (1 CRISPR)
Cylindrospermum stagnale PCC 7417     (11 CRISPRs, 15 questionable structures)
Cytophaga hutchinsonii ATCC 33406
Dactylococcopsis salina PCC 8305     (17 questionable structures)
Dechloromonas aromatica RCB
Dechlorosoma suillum PS
Deferribacter desulfuricans SSM1     (4 CRISPRs)
Dehalobacter sp. CF
Dehalobacter sp. DCA
Dehalococcoides ethenogenes 195
Dehalococcoides mccartyi BTF08
Dehalococcoides mccartyi DCMB5     (2 CRISPRs)
Dehalococcoides mccartyi GY50
Dehalococcoides sp. BAV1     (1 CRISPR)
Dehalococcoides sp. CBDB1     (1 CRISPR)
Dehalococcoides sp. GT     (1 CRISPR)
Dehalococcoides sp. VS
Dehalogenimonas lykanthroporepellens BL-DC-9     (2 questionable structures)
Deinococcus deserti VCD115
Deinococcus geothermalis DSM 11300     (6 CRISPRs)
Deinococcus gobiensis I-0     (4 CRISPRs, 2 questionable structures)
Deinococcus maricopensis DSM 21211     (2 questionable structures)
Deinococcus peraridilitoris DSM 19664
Deinococcus proteolyticus MRP     (4 CRISPRs, 2 questionable structures)
Deinococcus radiodurans R1     (1 questionable structure)
Delftia acidovorans SPH-1     (1 CRISPR)
Delftia sp. Cs1-4     (2 CRISPRs)
delta proteobacterium BABL1
Denitrovibrio acetiphilus DSM 12809     (1 questionable structure)
Desulfarculus baarsii DSM 2075     (3 CRISPRs, 3 questionable structures)
Desulfatibacillum alkenivorans AK-01     (1 CRISPR)
Desulfitobacterium dehalogenans ATCC 51507     (1 CRISPR, 1 questionable structure)
Desulfitobacterium dichloroeliminans LMG P-21439
Desulfitobacterium hafniense DCB-2     (5 CRISPRs, 1 questionable structure)
Desulfitobacterium hafniense Y51     (6 CRISPRs, 1 questionable structure)
Desulfobacca acetoxidans DSM 11109     (7 CRISPRs, 3 questionable structures)
Desulfobacterium autotrophicum HRM2     (1 CRISPR, 1 questionable structure)
Desulfobacula toluolica Tol2     (3 CRISPRs, 1 questionable structure)
Desulfobulbus propionicus DSM 2032     (1 CRISPR)
Desulfocapsa sulfexigens DSM 10523     (1 CRISPR)
Desulfohalobium retbaense DSM 5692     (1 CRISPR)
Desulfomicrobium baculatum DSM 4028     (2 questionable structures)
Desulfomonile tiedjei DSM 6799     (2 CRISPRs)
Desulfosporosinus acidiphilus SJ4     (1 CRISPR)
Desulfosporosinus meridiei DSM 13257
Desulfosporosinus orientis DSM 765     (2 CRISPRs)
Desulfotalea psychrophila LSv54     (1 CRISPR, 3 questionable structures)
Desulfotomaculum acetoxidans DSM 771     (11 CRISPRs, 1 questionable structure)
Desulfotomaculum carboxydivorans CO-1-SRB     (4 CRISPRs)
Desulfotomaculum gibsoniae DSM 7213     (6 CRISPRs, 4 questionable structures)
Desulfotomaculum kuznetsovii DSM 6115     (10 CRISPRs, 1 questionable structure)
Desulfotomaculum reducens MI-1     (5 CRISPRs)
Desulfotomaculum ruminis DSM 2154     (10 CRISPRs, 1 questionable structure)
Desulfovibrio aespoeensis Aspo-2
Desulfovibrio africanus str. Walvis Bay
Desulfovibrio desulfuricans G20     (1 CRISPR)
Desulfovibrio desulfuricans ND132     (1 CRISPR, 1 questionable structure)
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774     (2 CRISPRs)
Desulfovibrio gigas DSM 1382 = ATCC 19364     (2 CRISPRs, 2 questionable structures)
Desulfovibrio hydrothermalis     (6 CRISPRs)
Desulfovibrio hydrothermalis AM13 = DSM 14728     (6 CRISPRs)
Desulfovibrio magneticus RS-1     (2 CRISPRs)
Desulfovibrio piezophilus
Desulfovibrio salexigens DSM 2638
Desulfovibrio vulgaris RCH1     (1 CRISPR, 1 questionable structure)
Desulfovibrio vulgaris str. 'Miyazaki F'     (1 CRISPR, 1 questionable structure)
Desulfovibrio vulgaris subsp. vulgaris DP4     (1 CRISPR, 1 questionable structure)
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough     (1 CRISPR, 1 questionable structure)
Desulfurispirillum indicum S5     (2 CRISPRs)
Desulfurivibrio alkaliphilus AHT2     (2 CRISPRs)
Desulfurobacterium thermolithotrophum DSM 11699     (1 CRISPR)
Diaphorobacter sp. TPSY     (1 CRISPR)
Dichelobacter nodosus VCS1703A     (1 CRISPR, 1 questionable structure)
Dickeya dadantii 3937     (4 CRISPRs)
Dickeya dadantii Ech586
Dickeya dadantii Ech703     (4 CRISPRs)
Dickeya zeae Ech1591     (4 CRISPRs, 2 questionable structures)
Dictyoglomus thermophilum H-6-12     (3 CRISPRs)
Dictyoglomus turgidum DSM 6724     (2 CRISPRs, 1 questionable structure)
Dinoroseobacter shibae DFL 12     (2 CRISPRs, 1 questionable structure)
Dyadobacter fermentans DSM 18053     (4 questionable structures)
Echinicola vietnamensis DSM 17526
Edwardsiella ictaluri 93-146
Edwardsiella tarda C07-087
Edwardsiella tarda EIB202     (1 questionable structure)
Edwardsiella tarda FL6-60
Eggerthella lenta DSM 2243     (2 CRISPRs)
Eggerthella sp. YY7918     (4 CRISPRs, 2 questionable structures)
Ehrlichia canis str. Jake
Ehrlichia chaffeensis str. Arkansas
Ehrlichia muris AS145     (3 questionable structures)
Ehrlichia ruminantium str. Gardel
Ehrlichia ruminantium str. Welgevonden
Elusimicrobium minutum Pei191     (1 CRISPR)
Emticicia oligotrophica DSM 17448     (4 questionable structures)
Enterobacter aerogenes EA1509E     (1 questionable structure)
Enterobacter aerogenes KCTC 2190     (1 questionable structure)
Enterobacter asburiae LF7a     (1 questionable structure)
Enterobacter cloacae EcWSU1
Enterobacter cloacae SCF1     (2 questionable structures)
Enterobacter cloacae subsp. cloacae ATCC 13047     (2 questionable structures)
Enterobacter cloacae subsp. cloacae ENHKU01
Enterobacter cloacae subsp. cloacae NCTC 9394     (1 CRISPR)
Enterobacter cloacae subsp. dissolvens SDM
Enterobacter sakazakii ATCC BAA-894     (3 CRISPRs, 6 questionable structures)
Enterobacter sp. 638     (2 CRISPRs, 6 questionable structures)
Enterobacter sp. R4-368
Enterobacteriaceae bacterium strain FGI 57     (1 CRISPR, 3 questionable structures)
Enterococcus casseliflavus EC20
Enterococcus faecalis 62     (1 CRISPR, 2 questionable structures)
Enterococcus faecalis D32     (2 CRISPRs, 1 questionable structure)
Enterococcus faecalis OG1RF     (2 CRISPRs, 1 questionable structure)
Enterococcus faecalis str. Symbioflor 1     (1 CRISPR, 1 questionable structure)
Enterococcus faecalis V583     (2 questionable structures)
Enterococcus faecium Aus0004
Enterococcus faecium Aus0085
Enterococcus faecium DO
Enterococcus faecium NRRL B-2354     (1 questionable structure)
Enterococcus hirae ATCC 9790     (1 CRISPR)
Enterococcus mundtii QU 25     (3 questionable structures)
Enterococcus phage EF62phi
Enterococcus sp. 7L76     (1 CRISPR, 1 questionable structure)
Erwinia amylovora     (3 CRISPRs, 1 questionable structure)
Erwinia amylovora ATCC 49946     (3 CRISPRs, 1 questionable structure)
Erwinia amylovora CFBP1430
Erwinia billingiae Eb661     (3 questionable structures)
Erwinia carotovora subsp. atroseptica SCRI1043     (3 CRISPRs, 1 questionable structure)
Erwinia pyrifoliae DSM 12163     (5 CRISPRs, 1 questionable structure)
Erwinia pyrifoliae Ep1/96     (5 CRISPRs, 3 questionable structures)
Erwinia sp. Ejp617     (4 CRISPRs, 2 questionable structures)
Erwinia tasmaniensis Et1/99     (2 CRISPRs)
Erysipelothrix rhusiopathiae str. Fujisawa
Erysipelothrix rhusiopathiae SY1027
Erythrobacter litoralis HTCC2594     (1 questionable structure)
Escherichia blattae DSM 4481     (1 CRISPR)
Escherichia coli 042     (2 CRISPRs, 3 questionable structures)
Escherichia coli 536     (1 CRISPR, 5 questionable structures)
Escherichia coli 55989     (2 CRISPRs)
Escherichia coli ABU 83972     (3 questionable structures)
Escherichia coli APEC O1     (2 CRISPRs, 3 questionable structures)
Escherichia coli APEC O78     (2 CRISPRs, 1 questionable structure)
Escherichia coli B str. REL606     (2 CRISPRs, 3 questionable structures)
Escherichia coli BL21(DE3)     (6 CRISPRs, 8 questionable structures)
Escherichia coli BW2952     (2 CRISPRs, 2 questionable structures)
Escherichia coli C str. ATCC 8739     (4 CRISPRs, 2 questionable structures)
Escherichia coli CFT073     (2 questionable structures)
Escherichia coli DH1     (4 CRISPRs, 5 questionable structures)
Escherichia coli E24377A     (3 CRISPRs)
Escherichia coli ED1a     (2 CRISPRs, 3 questionable structures)
Escherichia coli ETEC H10407     (2 CRISPRs, 4 questionable structures)
Escherichia coli HS     (3 CRISPRs, 2 questionable structures)
Escherichia coli IAI1     (3 CRISPRs, 1 questionable structure)
Escherichia coli IAI39     (1 CRISPR)
Escherichia coli IHE3034     (2 CRISPRs, 3 questionable structures)
Escherichia coli JJ1886     (1 CRISPR, 1 questionable structure)
Escherichia coli KO11FL     (4 CRISPRs, 8 questionable structures)
Escherichia coli LF82     (2 CRISPRs, 2 questionable structures)
Escherichia coli LY180     (2 CRISPRs, 1 questionable structure)
Escherichia coli NA114     (1 CRISPR, 9 questionable structures)
Escherichia coli O103:H2 str. 12009     (2 CRISPRs, 2 questionable structures)
Escherichia coli O104:H4 str. 2009EL-2050     (2 CRISPRs, 1 questionable structure)
Escherichia coli O104:H4 str. 2009EL-2071     (2 CRISPRs, 1 questionable structure)
Escherichia coli O104:H4 str. 2011C-3493     (2 CRISPRs, 1 questionable structure)
Escherichia coli O111:H- str. 11128     (2 CRISPRs, 1 questionable structure)
Escherichia coli O127:H6 str. E2348/69     (2 questionable structures)
Escherichia coli O157:H7     (2 CRISPRs)
Escherichia coli O157:H7 str. EC4115     (2 CRISPRs)
Escherichia coli O157:H7 str. Sakai     (2 CRISPRs)
Escherichia coli O157:H7 str. TW14359     (2 CRISPRs)
Escherichia coli O26:H11 str. 11368     (2 CRISPRs, 1 questionable structure)
Escherichia coli O55:H7 str. CB9615     (2 CRISPRs)
Escherichia coli O55:H7 str. RM12579     (2 CRISPRs)
Escherichia coli O7:K1 str. CE10     (1 CRISPR)
Escherichia coli O83:H1 str. NRG 857C     (2 CRISPRs, 2 questionable structures)
Escherichia coli P12b     (2 CRISPRs, 4 questionable structures)
Escherichia coli PMV-1     (2 CRISPRs, 3 questionable structures)
Escherichia coli S88     (2 CRISPRs, 2 questionable structures)
Escherichia coli SE11     (2 CRISPRs, 1 questionable structure)
Escherichia coli SE15     (1 CRISPR, 1 questionable structure)
Escherichia coli SECEC SMS-3-5     (1 CRISPR)
Escherichia coli str. 'clone D i14'     (2 questionable structures)
Escherichia coli str. 'clone D i2'     (2 questionable structures)
Escherichia coli str. K-12 substr. DH10B     (2 CRISPRs, 2 questionable structures)
Escherichia coli str. K-12 substr. MDS42     (2 CRISPRs, 2 questionable structures)
Escherichia coli str. K-12 substr. MG1655     (2 CRISPRs, 2 questionable structures)
Escherichia coli str. K-12 substr. W3110     (2 CRISPRs, 2 questionable structures)
Escherichia coli UM146     (2 CRISPRs, 2 questionable structures)
Escherichia coli UMN026     (3 CRISPRs, 5 questionable structures)
Escherichia coli UMNK88     (2 CRISPRs, 2 questionable structures)
Escherichia coli UTI89     (2 CRISPRs, 3 questionable structures)
Escherichia coli W     (4 CRISPRs, 2 questionable structures)
Escherichia coli Xuzhou21     (2 CRISPRs)
Escherichia fergusonii ATCC 35469     (3 CRISPRs, 1 questionable structure)
Ethanoligenens harbinense YUAN-3     (1 CRISPR)
Eubacterium eligens ATCC 27750     (1 CRISPR, 1 questionable structure)
Eubacterium limosum KIST612     (2 CRISPRs)
Eubacterium rectale ATCC 33656     (2 CRISPRs)
Eubacterium rectale DSM 17629     (1 CRISPR, 1 questionable structure)
Eubacterium rectale M104/1     (7 CRISPRs, 2 questionable structures)
Eubacterium siraeum 70/3     (2 CRISPRs, 3 questionable structures)
Eubacterium siraeum V10Sc8a     (2 CRISPRs, 1 questionable structure)
Exiguobacterium antarcticum B7
Exiguobacterium sibiricum 255-15     (1 CRISPR)
Exiguobacterium sp. AT1b
Exiguobacterium sp. MH3
Faecalibacterium prausnitzii L2-6     (1 CRISPR, 1 questionable structure)
Faecalibacterium prausnitzii SL3/3     (1 CRISPR)
Ferrimonas balearica DSM 9799     (1 questionable structure)
Ferroplasma acidarmanus fer1     (2 CRISPRs, 1 questionable structure)
Fervidobacterium nodosum Rt17-B1     (2 CRISPRs)
Fervidobacterium pennivorans DSM 9078     (5 CRISPRs, 1 questionable structure)
Fibrella aestuarina BUZ 2
Fibrobacter succinogenes subsp. succinogenes S85     (29 CRISPRs)
Filifactor alocis ATCC 35896     (2 CRISPRs)
Finegoldia magna ATCC 29328     (4 CRISPRs)
Flavobacteriaceae bacterium 3519-10     (1 questionable structure)
Flavobacteriales bacterium HTCC2170
Flavobacterium branchiophilum FL-15     (6 CRISPRs, 4 questionable structures)
Flavobacterium columnare ATCC 49512     (3 CRISPRs)
Flavobacterium indicum GPTSA100-9
Flavobacterium johnsoniae UW101
Flavobacterium psychrophilum JIP02/86     (1 CRISPR, 2 questionable structures)
Flexibacter litoralis DSM 6794     (3 CRISPRs)
Flexistipes sinusarabici DSM 4947     (7 CRISPRs)
Fluviicola taffensis DSM 16823     (1 CRISPR)
Francisella cf. novicida 3523     (2 CRISPRs)
Francisella cf. novicida Fx1     (2 CRISPRs)
Francisella noatunensis subsp. orientalis LADL--07-285A
Francisella noatunensis subsp. orientalis str. Toba 04
Francisella philomiragia subsp. philomiragia ATCC 25017     (1 CRISPR)
Francisella sp. TX077308
Francisella tularensis subsp. holarctica
Francisella tularensis subsp. holarctica F92
Francisella tularensis subsp. holarctica FSC200
Francisella tularensis subsp. holarctica FTA
Francisella tularensis subsp. holarctica OSU18
Francisella tularensis subsp. mediasiatica FSC147
Francisella tularensis subsp. novicida U112     (2 CRISPRs, 2 questionable structures)
Francisella tularensis subsp. tularensis FSC 198
Francisella tularensis subsp. tularensis NE061598
Francisella tularensis subsp. tularensis SCHU S4
Francisella tularensis subsp. tularensis WY96-3418
Francisella tularensis TI0902
Francisella tularensis TIGB03
Frankia alni ACN14a     (7 CRISPRs, 4 questionable structures)
Frankia sp. CcI3     (4 CRISPRs, 3 questionable structures)
Frankia sp. EAN1pec     (5 CRISPRs, 1 questionable structure)
Frankia sp. EuI1c     (7 questionable structures)
Frankia symbiont of Datisca glomerata     (1 CRISPR, 7 questionable structures)
Frateuria aurantia DSM 6220
Fusobacterium nucleatum subsp. animalis 4_8     (1 CRISPR, 2 questionable structures)
Fusobacterium nucleatum subsp. nucleatum ATCC 25586     (1 CRISPR)
Fusobacterium nucleatum subsp. polymorphum ATCC 10953     (1 questionable structure)
Fusobacterium nucleatum subsp. vincentii 3_1_36A2     (1 CRISPR, 1 questionable structure)
Gallibacterium anatis UMN179     (2 CRISPRs)
Gallionella capsiferriformans ES-2     (1 questionable structure)
gamma proteobacterium HdN1     (2 CRISPRs, 2 questionable structures)
Gardnerella vaginalis 409-05     (1 CRISPR, 3 questionable structures)
Gardnerella vaginalis ATCC 14019     (1 CRISPR, 1 questionable structure)
Gardnerella vaginalis HMP9231
Geitlerinema sp. PCC 7407     (1 CRISPR, 3 questionable structures)
Gemmatimonas aurantiaca T-27
Geobacillus kaustophilus HTA426     (4 CRISPRs, 1 questionable structure)
Geobacillus sp. C56-T3     (4 CRISPRs, 3 questionable structures)
Geobacillus sp. GHH01     (5 CRISPRs)
Geobacillus sp. JF8     (2 CRISPRs)
Geobacillus sp. WCH70     (6 CRISPRs)
Geobacillus sp. Y4.1MC1     (5 CRISPRs, 4 questionable structures)
Geobacillus sp. Y412MC10     (1 questionable structure)
Geobacillus sp. Y412MC52     (6 CRISPRs, 2 questionable structures)
Geobacillus sp. Y412MC61     (6 CRISPRs, 3 questionable structures)
Geobacillus thermodenitrificans NG80-2     (3 CRISPRs, 1 questionable structure)
Geobacillus thermoglucosidasius C56-YS93     (6 CRISPRs, 2 questionable structures)
Geobacillus thermoleovorans CCB_US3_UF5     (2 CRISPRs, 2 questionable structures)
Geobacter bemidjiensis Bem     (6 questionable structures)
Geobacter lovleyi SZ     (1 CRISPR)
Geobacter metallireducens GS-15     (1 CRISPR, 1 questionable structure)
Geobacter sp. FRC-32     (1 CRISPR)
Geobacter sp. M18     (4 questionable structures)
Geobacter sp. M21     (4 questionable structures)
Geobacter sulfurreducens KN400     (1 CRISPR)
Geobacter sulfurreducens PCA     (2 CRISPRs)
Geobacter uraniumreducens Rf4     (2 CRISPRs, 3 questionable structures)
Geodermatophilus obscurus DSM 43160     (2 questionable structures)
Glaciecola nitratireducens FR1064
Glaciecola psychrophila 170
Glaciecola sp. 4H-3-7+YE-5     (1 CRISPR)
Glaciecola sp. 4H-3-7+YE-5     (2 questionable structures)
Gloeobacter kilaueensis JS1     (5 CRISPRs, 1 questionable structure)
Gloeobacter violaceus PCC 7421     (1 questionable structure)
Gloeocapsa sp. PCC 7428     (3 CRISPRs, 3 questionable structures)
Gluconacetobacter diazotrophicus PAl 5     (7 CRISPRs)
Gluconacetobacter xylinus NBRC 3288     (3 CRISPRs)
Gluconobacter oxydans 621H
Gluconobacter oxydans H24     (2 CRISPRs)
Gordonia bronchialis DSM 43247     (3 questionable structures)
Gordonia polyisoprenivorans VH2     (1 CRISPR, 3 questionable structures)
Gordonia sp. KTR9     (2 questionable structures)
Gordonibacter pamelaeae 7-10-1-b     (2 CRISPRs)
Gramella forsetii KT0803
Granulibacter bethesdensis CGDNIH1     (4 CRISPRs)
Granulicella mallensis MP5ACTX8
Haemophilus ducreyi 35000HP
Haemophilus influenzae 10810     (1 questionable structure)
Haemophilus influenzae 86-028NP     (1 questionable structure)
Haemophilus influenzae F3031     (1 questionable structure)
Haemophilus influenzae F3047
Haemophilus influenzae KR494     (1 questionable structure)
Haemophilus influenzae PittEE     (1 questionable structure)
Haemophilus influenzae PittGG
Haemophilus influenzae R2846
Haemophilus influenzae R2866     (2 questionable structures)
Haemophilus influenzae Rd KW20     (1 questionable structure)
Haemophilus parainfluenzae T3T1     (1 CRISPR)
Haemophilus parasuis SH0165     (2 questionable structures)
Haemophilus parasuis ZJ0906     (1 questionable structure)
Haemophilus somnus 129PT
Haemophilus somnus 2336
Hahella chejuensis KCTC 2396     (2 CRISPRs, 1 questionable structure)
Halanaerobium praevalens DSM 2228     (1 CRISPR)
Halanaerobium sp. 'sapolanicus'     (1 CRISPR, 2 questionable structures)
Haliangium ochraceum DSM 14365     (3 CRISPRs, 14 questionable structures)
Haliscomenobacter hydrossis DSM 1100     (9 CRISPRs, 6 questionable structures)
Haloarcula hispanica N601     (1 CRISPR)
Halobacillus halophilus DSM 2266
Halobacteroides halobius DSM 5150     (2 CRISPRs)
Halomonas elongata DSM 2581     (1 CRISPR, 2 questionable structures)
Halorhabdus tiamatea SARL4B     (1 CRISPR, 1 questionable structure)
Halorhodospira halophila SL1     (2 CRISPRs, 1 questionable structure)
Halothece sp. PCC 7418     (4 CRISPRs, 4 questionable structures)
Halothermothrix orenii H 168     (1 CRISPR)
Halothiobacillus neapolitanus c2     (1 CRISPR)
Halyomorpha halys symbiont
Helicobacter acinonychis str. Sheeba
Helicobacter bizzozeronii CIII-1
Helicobacter cetorum MIT 00-7128     (1 CRISPR)
Helicobacter cetorum MIT 99-5656
Helicobacter cinaedi ATCC BAA-847     (2 CRISPRs)
Helicobacter cinaedi PAGU611     (2 CRISPRs)
Helicobacter felis ATCC 49179     (1 questionable structure)
Helicobacter heilmannii ASB1.4     (4 questionable structures)
Helicobacter hepaticus ATCC 51449
Helicobacter mustelae 12198     (1 CRISPR, 3 questionable structures)
Helicobacter pylori
Helicobacter pylori 2017     (1 CRISPR, 1 questionable structure)
Helicobacter pylori 2018     (1 CRISPR, 1 questionable structure)
Helicobacter pylori 26695     (2 questionable structures)
Helicobacter pylori 35A
Helicobacter pylori 51     (1 CRISPR)
Helicobacter pylori 52     (1 questionable structure)
Helicobacter pylori 83     (2 CRISPRs, 2 questionable structures)
Helicobacter pylori 908     (1 CRISPR, 1 questionable structure)
Helicobacter pylori Aklavik117     (1 questionable structure)
Helicobacter pylori Aklavik86
Helicobacter pylori B38     (1 questionable structure)
Helicobacter pylori B8
Helicobacter pylori BM012A     (1 questionable structure)
Helicobacter pylori BM012S     (1 questionable structure)
Helicobacter pylori Cuz20     (1 CRISPR)
Helicobacter pylori ELS37     (1 questionable structure)
Helicobacter pylori F16     (2 questionable structures)
Helicobacter pylori F30     (2 CRISPRs)
Helicobacter pylori F32
Helicobacter pylori F57     (2 CRISPRs)
Helicobacter pylori G27     (2 questionable structures)
Helicobacter pylori Gambia94/24     (1 CRISPR, 1 questionable structure)
Helicobacter pylori HPAG1     (1 questionable structure)
Helicobacter pylori HUP-B14     (1 questionable structure)
Helicobacter pylori India7     (1 CRISPR)
Helicobacter pylori J99
Helicobacter pylori Lithuania75     (1 questionable structure)
Helicobacter pylori OK113
Helicobacter pylori OK310     (1 CRISPR)
Helicobacter pylori P12
Helicobacter pylori PeCan18
Helicobacter pylori PeCan4     (1 CRISPR, 2 questionable structures)
Helicobacter pylori Puno120
Helicobacter pylori Puno135
Helicobacter pylori Rif1     (1 questionable structure)
Helicobacter pylori Rif2     (1 questionable structure)
Helicobacter pylori Sat464
Helicobacter pylori Shi112     (1 CRISPR)
Helicobacter pylori Shi169     (1 CRISPR, 1 questionable structure)
Helicobacter pylori Shi417     (1 CRISPR)
Helicobacter pylori Shi470
Helicobacter pylori SJM180     (2 questionable structures)
Helicobacter pylori SNT49     (1 CRISPR)
Helicobacter pylori SouthAfrica20     (1 questionable structure)
Helicobacter pylori SouthAfrica7     (2 questionable structures)
Helicobacter pylori UM032
Helicobacter pylori UM037     (1 CRISPR, 1 questionable structure)
Helicobacter pylori UM066     (1 CRISPR)
Helicobacter pylori UM298
Helicobacter pylori UM299
Helicobacter pylori v225d     (2 questionable structures)
Helicobacter pylori XZ274     (1 CRISPR)
Heliobacterium modesticaldum Ice1     (3 CRISPRs)
Herbaspirillum seropedicae SmR1     (2 questionable structures)
Herminiimonas arsenicoxydans
Herpetosiphon aurantiacus ATCC 23779     (13 CRISPRs, 8 questionable structures)
Hippea maritima DSM 10411
Hirschia baltica ATCC 49814     (1 questionable structure)
Hydrogenobacter thermophilus TK-6     (2 CRISPRs)
Hydrogenobaculum sp. HO     (7 CRISPRs, 1 questionable structure)
Hydrogenobaculum sp. SN     (7 CRISPRs, 1 questionable structure)
Hydrogenobaculum sp. Y04AAS1     (1 CRISPR, 1 questionable structure)
Hyphomicrobium denitrificans 1NES1     (1 questionable structure)
Hyphomicrobium denitrificans ATCC 51888     (3 questionable structures)
Hyphomicrobium nitrativorans NL23     (1 CRISPR, 5 questionable structures)
Hyphomicrobium sp. MC1     (1 questionable structure)
Hyphomonas neptunium ATCC 15444
Idiomarina loihiensis GSL 199
Idiomarina loihiensis L2TR
Ignavibacterium album JCM 16511     (3 CRISPRs, 3 questionable structures)
Ilumatobacter coccineum YM16-304     (10 questionable structures)
Ilyobacter polytropus DSM 2926     (1 CRISPR, 1 questionable structure)
Intrasporangium calvum DSM 43043     (3 questionable structures)
Isoptericola variabilis 225     (3 questionable structures)
Isosphaera pallida ATCC 43644     (2 CRISPRs, 4 questionable structures)
Jannaschia sp. CCS1
Janthinobacterium sp. Marseille
Jonesia denitrificans DSM 20603     (2 questionable structures)
Kangiella koreensis DSM 16069
Ketogulonicigenium vulgare Y25     (1 CRISPR)
Ketogulonigenium vulgarum WSH-001     (1 CRISPR)
Kineococcus radiotolerans SRS30216
Kitasatospora setae KM-6054     (3 CRISPRs, 4 questionable structures)
Klebsiella oxytoca E718     (1 CRISPR, 2 questionable structures)
Klebsiella oxytoca KCTC 1686     (2 CRISPRs)
Klebsiella pneumoniae     (1 CRISPR)
Klebsiella pneumoniae 342     (1 CRISPR, 1 questionable structure)
Klebsiella pneumoniae CG43     (1 questionable structure)
Klebsiella pneumoniae JM45     (1 questionable structure)
Klebsiella pneumoniae KCTC 2242     (1 questionable structure)
Klebsiella pneumoniae NTUH-K2044     (2 CRISPRs, 2 questionable structures)
Klebsiella pneumoniae subsp. pneumoniae 1084     (2 CRISPRs)
Klebsiella pneumoniae subsp. pneumoniae HS11286     (1 questionable structure)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Klebsiella variicola At-22     (2 CRISPRs, 1 questionable structure)
Kocuria rhizophila DC2201
Kosmotoga olearia TBF 19.5.1     (5 CRISPRs, 1 questionable structure)
Kribbella flavida DSM 17836     (8 questionable structures)
Krokinobacter sp. 4H-3-7-5
Kytococcus sedentarius DSM 20547     (1 questionable structure)
Lacinutrix sp. 5H-3-7-4
Lactobacillus acidophilus 30SC     (1 questionable structure)
Lactobacillus acidophilus La-14     (1 CRISPR)
Lactobacillus acidophilus NCFM     (1 CRISPR)
Lactobacillus amylovorus GRL 1112
Lactobacillus amylovorus GRL1118     (3 CRISPRs)
Lactobacillus brevis ATCC 367     (2 CRISPRs)
Lactobacillus brevis KB290     (1 CRISPR)
Lactobacillus buchneri
Lactobacillus buchneri CD034     (5 CRISPRs)
Lactobacillus buchneri NRRL B-30929     (1 CRISPR, 2 questionable structures)
Lactobacillus casei
Lactobacillus casei ATCC 334     (1 CRISPR, 2 questionable structures)
Lactobacillus casei BD-II     (1 CRISPR)
Lactobacillus casei BL23     (1 CRISPR)
Lactobacillus casei LC2W     (1 CRISPR)
Lactobacillus casei LOCK919     (1 CRISPR, 2 questionable structures)
Lactobacillus casei str. Zhang     (1 CRISPR, 1 questionable structure)
Lactobacillus casei W56     (1 CRISPR)
Lactobacillus crispatus ST1     (3 CRISPRs)
Lactobacillus delbrueckii subsp. bulgaricus 2038     (1 CRISPR, 2 questionable structures)
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842     (1 CRISPR, 2 questionable structures)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365     (1 CRISPR, 1 questionable structure)
Lactobacillus delbrueckii subsp. bulgaricus ND02     (1 CRISPR, 1 questionable structure)
Lactobacillus fermentum CECT 5716     (2 CRISPRs, 2 questionable structures)
Lactobacillus fermentum F-6     (1 CRISPR)
Lactobacillus fermentum IFO 3956     (2 CRISPRs, 2 questionable structures)
Lactobacillus gasseri ATCC 33323
Lactobacillus helveticus CNRZ32
Lactobacillus helveticus DPC 4571     (2 CRISPRs, 1 questionable structure)
Lactobacillus helveticus H10     (2 CRISPRs, 1 questionable structure)
Lactobacillus helveticus R0052     (1 CRISPR, 1 questionable structure)
Lactobacillus johnsonii DPC 6026     (1 CRISPR)
Lactobacillus johnsonii FI9785     (1 questionable structure)
Lactobacillus johnsonii N6.2     (1 questionable structure)
Lactobacillus johnsonii NCC 533     (1 questionable structure)
Lactobacillus kefiranofaciens ZW3     (2 CRISPRs)
Lactobacillus paracasei subsp. paracasei 8700:2     (1 CRISPR, 1 questionable structure)
Lactobacillus plantarum 16     (1 questionable structure)
Lactobacillus plantarum JDM1
Lactobacillus plantarum subsp. plantarum P-8     (2 questionable structures)
Lactobacillus plantarum subsp. plantarum ST-III
Lactobacillus plantarum WCFS1
Lactobacillus plantarum ZJ316     (1 CRISPR)
Lactobacillus reuteri DSM 20016
Lactobacillus reuteri I5007
Lactobacillus reuteri JCM 1112
Lactobacillus reuteri SD2112
Lactobacillus reuteri TD1     (1 CRISPR)
Lactobacillus rhamnosus ATCC 8530     (1 questionable structure)
Lactobacillus rhamnosus GG     (2 CRISPRs, 2 questionable structures)
Lactobacillus rhamnosus Lc 705     (1 questionable structure)
Lactobacillus rhamnosus LOCK900     (1 CRISPR, 2 questionable structures)
Lactobacillus rhamnosus LOCK908     (1 questionable structure)
Lactobacillus ruminis ATCC 27782     (2 CRISPRs)
Lactobacillus sakei subsp. sakei 23K
Lactobacillus salivarius CECT 5713     (1 CRISPR, 1 questionable structure)
Lactobacillus salivarius subsp. salivarius     (1 CRISPR, 1 questionable structure)
Lactobacillus sanfranciscensis TMW 1.1304     (1 CRISPR)
Lactococcus garvieae ATCC 49156     (1 questionable structure)
Lactococcus garvieae Lg2     (1 questionable structure)
Lactococcus lactis subsp. cremoris A76
Lactococcus lactis subsp. cremoris KW2
Lactococcus lactis subsp. cremoris MG1363
Lactococcus lactis subsp. cremoris NZ9000
Lactococcus lactis subsp. cremoris SK11
Lactococcus lactis subsp. cremoris UC509.9
Lactococcus lactis subsp. lactis CV56
Lactococcus lactis subsp. lactis Il1403
Lactococcus lactis subsp. lactis IO-1
Lactococcus lactis subsp. lactis KF147     (2 questionable structures)
Lactococcus lactis subsp. lactis KLDS 4.0325
Laribacter hongkongensis HLHK9
Lawsonia intracellularis N343     (1 questionable structure)
Lawsonia intracellularis PHE/MN1-00     (1 questionable structure)
Leadbetterella byssophila DSM 17132     (2 CRISPRs, 3 questionable structures)
Legionella longbeachae NSW150
Legionella pneumophila 2300/99 Alcoy     (1 CRISPR, 1 questionable structure)
Legionella pneumophila str. Corby     (2 questionable structures)
Legionella pneumophila str. Lens     (3 CRISPRs)
Legionella pneumophila str. Paris     (1 CRISPR)
Legionella pneumophila subsp. pneumophila
Legionella pneumophila subsp. pneumophila ATCC 43290
Legionella pneumophila subsp. pneumophila str. Hextuple_2q
Legionella pneumophila subsp. pneumophila str. Hextuple_3a
Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Legionella pneumophila subsp. pneumophila str. Thunder Bay
Leifsonia xyli subsp. cynodontis DSM 46306
Leifsonia xyli subsp. xyli str. CTCB07
Leisingera methylohalidivorans DSM 14336
Leptolyngbya sp. PCC 7376     (3 questionable structures)
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'     (1 questionable structure)
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'     (1 questionable structure)
Leptospira borgpetersenii serovar Hardjo-bovis JB197     (1 questionable structure)
Leptospira borgpetersenii serovar Hardjo-bovis L550     (1 questionable structure)
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130     (1 CRISPR, 5 questionable structures)
Leptospira interrogans serovar Lai str. 56601     (1 questionable structure)
Leptospira interrogans serovar Lai str. IPAV     (7 CRISPRs, 2 questionable structures)
Leptospirillum ferriphilum ML-04     (1 questionable structure)
Leptospirillum ferrooxidans C2-3
Leptothrix cholodnii SP-6     (1 CRISPR)
Leptotrichia buccalis DSM 1135     (4 CRISPRs, 1 questionable structure)
Leuconostoc carnosum JB16
Leuconostoc citreum KM20
Leuconostoc gasicomitatum LMG 18811
Leuconostoc gelidum JB7     (1 CRISPR)
Leuconostoc kimchii IMSNU11154
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293     (1 questionable structure)
Leuconostoc mesenteroides subsp. mesenteroides J18
Leuconostoc sp. C2
Liberibacter crescens BT-1     (2 questionable structures)
Listeria innocua Clip11262     (1 CRISPR, 1 questionable structure)
Listeria ivanovii subsp. ivanovii PAM 55     (2 CRISPRs, 1 questionable structure)
Listeria monocytogenes     (9 CRISPRs, 10 questionable structures)
Listeria monocytogenes 07PF0776
Listeria monocytogenes 08-5578     (1 CRISPR, 2 questionable structures)
Listeria monocytogenes 08-5923     (1 CRISPR, 2 questionable structures)
Listeria monocytogenes 10403S     (2 CRISPRs, 2 questionable structures)
Listeria monocytogenes ATCC 19117     (1 questionable structure)
Listeria monocytogenes Clip81459
Listeria monocytogenes EGD     (2 CRISPRs, 2 questionable structures)
Listeria monocytogenes EGD-e     (1 CRISPR, 3 questionable structures)
Listeria monocytogenes Finland 1998     (2 CRISPRs, 2 questionable structures)
Listeria monocytogenes FSL R2-561     (1 CRISPR, 2 questionable structures)
Listeria monocytogenes HCC23     (2 CRISPRs)
Listeria monocytogenes J0161     (3 CRISPRs, 1 questionable structure)
Listeria monocytogenes J1-220     (1 questionable structure)
Listeria monocytogenes J1816     (1 questionable structure)
Listeria monocytogenes L312     (1 CRISPR)
Listeria monocytogenes L99     (2 CRISPRs)
Listeria monocytogenes M7     (2 CRISPRs)
Listeria monocytogenes N53-1
Listeria monocytogenes serotype 4b str. LL195
Listeria monocytogenes serotype 7 str. SLCC2482     (2 CRISPRs, 1 questionable structure)
Listeria monocytogenes SLCC2372     (1 CRISPR, 2 questionable structures)
Listeria monocytogenes SLCC2376     (1 CRISPR, 1 questionable structure)
Listeria monocytogenes SLCC2378
Listeria monocytogenes SLCC2479     (1 CRISPR, 2 questionable structures)
Listeria monocytogenes SLCC2540     (1 CRISPR, 1 questionable structure)
Listeria monocytogenes SLCC2755     (2 CRISPRs, 1 questionable structure)
Listeria monocytogenes SLCC5850     (2 CRISPRs, 2 questionable structures)
Listeria monocytogenes SLCC7179     (1 CRISPR)
Listeria monocytogenes str. 4b F2365
Listeria seeligeri serovar 1/2b str. SLCC3954     (4 CRISPRs, 1 questionable structure)
Listeria welshimeri serovar 6b str. SLCC5334
Listonella anguillarum M3     (1 questionable structure)
Lysinibacillus sphaericus C3-41     (1 CRISPR, 1 questionable structure)
Macrococcus caseolyticus JCSC5402     (2 questionable structures)
Magnetococcus sp. MC-1     (1 CRISPR, 1 questionable structure)
Magnetospirillum gryphiswaldense MSR-1 v2     (2 questionable structures)
Magnetospirillum magneticum AMB-1
Mahella australiensis 50-1 BON     (2 CRISPRs, 1 questionable structure)
Mannheimia haemolytica D153     (1 CRISPR, 2 questionable structures)
Mannheimia haemolytica D171     (1 CRISPR, 1 questionable structure)
Mannheimia haemolytica D174     (1 CRISPR, 2 questionable structures)
Mannheimia haemolytica M42548     (1 CRISPR, 2 questionable structures)
Mannheimia haemolytica USDA-ARS-USMARC-183     (1 CRISPR, 3 questionable structures)
Mannheimia haemolytica USDA-ARS-USMARC-185     (1 CRISPR, 2 questionable structures)
Mannheimia haemolytica USMARC_2286     (1 CRISPR, 2 questionable structures)
Mannheimia succiniciproducens MBEL55E     (3 CRISPRs)
Maricaulis maris MCS10
Marinithermus hydrothermalis DSM 14884     (5 CRISPRs, 2 questionable structures)
Marinitoga piezophila KA3     (5 CRISPRs)
Marinobacter adhaerens HP15
Marinobacter aquaeolei VT8
Marinobacter hydrocarbonoclasticus ATCC 49840
Marinobacter sp. BSs20148     (1 questionable structure)
Marinomonas mediterranea MMB-1     (5 CRISPRs)
Marinomonas posidonica IVIA-Po-181
Marinomonas sp. MWYL1     (2 CRISPRs)
Marivirga tractuosa DSM 4126
Megamonas hypermegale ART12/1     (7 CRISPRs)
Megasphaera elsdenii DSM 20460     (6 CRISPRs, 5 questionable structures)
Meiothermus ruber DSM 1279     (12 CRISPRs)
Meiothermus silvanus DSM 9946     (8 CRISPRs, 2 questionable structures)
Melioribacter roseus P3M     (3 CRISPRs)
Melissococcus plutonius ATCC 35311     (1 questionable structure)
Melissococcus plutonius DAT561     (1 CRISPR, 1 questionable structure)
Mesoplasma florum L1     (1 questionable structure)
Mesoplasma florum W37     (1 questionable structure)
Mesorhizobium australicum WSM2073
Mesorhizobium ciceri biovar biserrulae WSM1271     (4 questionable structures)
Mesorhizobium loti MAFF303099
Mesorhizobium opportunistum WSM2075     (3 questionable structures)
Mesorhizobium sp. BNC1
Mesotoga prima MesG1.Ag.4.2     (8 CRISPRs, 2 questionable structures)
Methanobacterium sp. MB1     (2 CRISPRs)
Methylacidiphilum infernorum V4     (5 CRISPRs)
Methylibium petroleiphilum PM1     (2 questionable structures)
Methylobacillus flagellatus KT     (2 CRISPRs)
Methylobacterium chloromethanicum CM4
Methylobacterium extorquens AM1     (2 questionable structures)
Methylobacterium extorquens DM4     (2 questionable structures)
Methylobacterium extorquens PA1     (2 questionable structures)
Methylobacterium nodulans ORS 2060     (4 CRISPRs, 4 questionable structures)
Methylobacterium populi BJ001
Methylobacterium radiotolerans JCM 2831
Methylobacterium sp. 4-46     (3 CRISPRs, 10 questionable structures)
Methylocella silvestris BL2     (1 questionable structure)
Methylococcus capsulatus str. Bath     (2 CRISPRs)
Methylocystis sp. SC2
Methylomicrobium alcaliphilum     (3 CRISPRs, 1 questionable structure)
Methylomonas methanica MC09     (4 CRISPRs, 2 questionable structures)
Methylophaga sp. JAM1     (1 CRISPR)
Methylophaga sp. JAM7     (1 CRISPR, 2 questionable structures)
Methylotenera mobilis JLW8
Methylotenera sp. 301
Methylovorus sp. MP688
Methylovorus sp. SIP3-4
Micavibrio aeruginosavorus ARL-13     (2 questionable structures)
Micavibrio aeruginosavorus EPB
Microbacterium testaceum StLB037     (7 questionable structures)
Micrococcus luteus NCTC 2665
Microcoleus sp. PCC 7113     (13 CRISPRs, 11 questionable structures)
Microcystis aeruginosa NIES-843     (3 CRISPRs, 18 questionable structures)
Microlunatus phosphovorus NM-1     (1 CRISPR, 3 questionable structures)
Micromonospora aurantiaca ATCC 27029     (5 questionable structures)
Micromonospora sp. L5
Mobiluncus curtisii ATCC 43063     (1 CRISPR)
Modestobacter marinus     (1 questionable structure)
Moorella thermoacetica ATCC 39073     (2 CRISPRs, 1 questionable structure)
Moraxella catarrhalis RH4     (2 CRISPRs, 1 questionable structure)
Morganella morganii subsp. morganii KT
Muricauda ruestringensis DSM 13258     (1 questionable structure)
Mycobacterium abscessus
Mycobacterium abscessus subsp. bolletii 50594
Mycobacterium africanum GM041182     (2 CRISPRs, 1 questionable structure)
Mycobacterium avium 104     (1 CRISPR, 6 questionable structures)
Mycobacterium avium subsp. paratuberculosis K-10     (1 questionable structure)
Mycobacterium avium subsp. paratuberculosis MAP4     (1 questionable structure)
Mycobacterium bovis AF2122/97     (2 CRISPRs, 1 questionable structure)
Mycobacterium bovis BCG str. Korea 1168P     (2 CRISPRs, 1 questionable structure)
Mycobacterium bovis BCG str. Mexico     (2 CRISPRs, 1 questionable structure)
Mycobacterium bovis BCG str. Pasteur 1173P2     (2 CRISPRs, 3 questionable structures)
Mycobacterium bovis BCG str. Tokyo 172     (2 CRISPRs, 1 questionable structure)
Mycobacterium canettii CIPT 140010059     (1 CRISPR, 2 questionable structures)
Mycobacterium canettii CIPT 140060008     (1 CRISPR, 2 questionable structures)
Mycobacterium canettii CIPT 140070008     (1 CRISPR, 2 questionable structures)
Mycobacterium canettii CIPT 140070010     (2 CRISPRs, 3 questionable structures)
Mycobacterium canettii CIPT 140070017     (2 CRISPRs, 5 questionable structures)
Mycobacterium chubuense NBB4     (1 questionable structure)
Mycobacterium gilvum PYR-GCK     (1 questionable structure)
Mycobacterium indicus pranii MTCC 9506     (4 questionable structures)
Mycobacterium intracellulare ATCC 13950     (3 questionable structures)
Mycobacterium intracellulare MOTT-02     (3 questionable structures)
Mycobacterium intracellulare MOTT-64     (1 questionable structure)
Mycobacterium kansasii ATCC 12478
Mycobacterium leprae Br4923
Mycobacterium leprae TN
Mycobacterium liflandii 128FXT     (1 questionable structure)
Mycobacterium marinum M     (5 questionable structures)
Mycobacterium massiliense str. GO 06     (1 questionable structure)
Mycobacterium neoaurum VKM Ac-1815D     (1 questionable structure)
Mycobacterium rhodesiae NBB3     (2 questionable structures)
Mycobacterium smegmatis JS623     (1 CRISPR, 2 questionable structures)
Mycobacterium smegmatis str. MC2 155
Mycobacterium sp. JDM601     (5 questionable structures)
Mycobacterium sp. JLS     (3 questionable structures)
Mycobacterium sp. KMS     (4 questionable structures)
Mycobacterium sp. MCS     (2 questionable structures)
Mycobacterium sp. MOTT36Y     (2 questionable structures)
Mycobacterium sp. Spyr1
Mycobacterium tuberculosis 7199-99     (1 CRISPR, 1 questionable structure)
Mycobacterium tuberculosis CAS/NITR204     (2 CRISPRs, 2 questionable structures)
Mycobacterium tuberculosis CCDC5079     (2 CRISPRs, 4 questionable structures)
Mycobacterium tuberculosis CCDC5180     (1 CRISPR, 1 questionable structure)
Mycobacterium tuberculosis CDC1551     (2 CRISPRs, 1 questionable structure)
Mycobacterium tuberculosis CTRI-2     (3 CRISPRs, 1 questionable structure)
Mycobacterium tuberculosis EAI5     (2 CRISPRs, 1 questionable structure)
Mycobacterium tuberculosis EAI5/NITR206     (2 CRISPRs, 1 questionable structure)
Mycobacterium tuberculosis F11     (2 CRISPRs, 1 questionable structure)
Mycobacterium tuberculosis H37Ra     (2 CRISPRs, 1 questionable structure)
Mycobacterium tuberculosis H37Rv     (4 CRISPRs, 2 questionable structures)
Mycobacterium tuberculosis KZN 1435     (2 CRISPRs, 2 questionable structures)
Mycobacterium tuberculosis KZN 4207     (2 CRISPRs, 2 questionable structures)
Mycobacterium tuberculosis KZN 605     (2 CRISPRs, 2 questionable structures)
Mycobacterium tuberculosis RGTB327     (3 CRISPRs, 1 questionable structure)
Mycobacterium tuberculosis RGTB423     (3 CRISPRs, 3 questionable structures)
Mycobacterium tuberculosis str. Beijing/NITR203     (2 CRISPRs, 2 questionable structures)
Mycobacterium tuberculosis str. Erdman = ATCC 35801     (2 CRISPRs, 1 questionable structure)
Mycobacterium tuberculosis str. Haarlem     (3 CRISPRs, 1 questionable structure)
Mycobacterium tuberculosis str. Haarlem/NITR202     (2 CRISPRs, 3 questionable structures)
Mycobacterium tuberculosis UT205     (4 CRISPRs, 1 questionable structure)
Mycobacterium ulcerans     (1 questionable structure)
Mycobacterium vanbaalenii PYR-1     (5 questionable structures)
Mycobacterium yongonense 05-1390     (1 CRISPR, 2 questionable structures)
Mycoplasma agalactiae
Mycoplasma agalactiae PG2
Mycoplasma arthritidis 158L3-1     (1 CRISPR)
Mycoplasma bovis HB0801
Mycoplasma bovis Hubei-1
Mycoplasma bovis PG45
Mycoplasma capricolum subsp. capricolum ATCC 27343     (1 questionable structure)
Mycoplasma conjunctivae
Mycoplasma crocodyli MP145     (1 questionable structure)
Mycoplasma cynos C142     (1 CRISPR)
Mycoplasma fermentans JER     (1 questionable structure)
Mycoplasma fermentans M64     (1 questionable structure)
Mycoplasma fermentans PG18     (1 questionable structure)
Mycoplasma gallisepticum CA06_2006.052-5-2P     (2 CRISPRs)
Mycoplasma gallisepticum NC06_2006.080-5-2P     (2 CRISPRs)
Mycoplasma gallisepticum NC08_2008.031-4-3P     (2 CRISPRs)
Mycoplasma gallisepticum NC95_13295-2-2P     (2 CRISPRs)
Mycoplasma gallisepticum NC96_1596-4-2P     (2 CRISPRs)
Mycoplasma gallisepticum NY01_2001.047-5-1P     (2 CRISPRs)
Mycoplasma gallisepticum R     (2 CRISPRs, 2 questionable structures)
Mycoplasma gallisepticum S6     (1 CRISPR, 3 questionable structures)
Mycoplasma gallisepticum str. F     (1 CRISPR)
Mycoplasma gallisepticum str. R(high)     (2 CRISPRs, 2 questionable structures)
Mycoplasma gallisepticum VA94_7994-1-7P     (2 CRISPRs)
Mycoplasma gallisepticum WI01_2001.043-13-2P     (2 CRISPRs)
Mycoplasma genitalium G37
Mycoplasma genitalium M2288
Mycoplasma genitalium M2321
Mycoplasma genitalium M6282
Mycoplasma genitalium M6320
Mycoplasma haemocanis str. Illinois
Mycoplasma haemofelis Ohio2
Mycoplasma haemofelis str. Langford 1
Mycoplasma hominis     (2 questionable structures)
Mycoplasma hyopneumoniae 168     (1 questionable structure)
Mycoplasma hyopneumoniae 168-L     (1 questionable structure)
Mycoplasma hyopneumoniae 232     (1 questionable structure)
Mycoplasma hyopneumoniae 7422
Mycoplasma hyopneumoniae 7448
Mycoplasma hyopneumoniae J     (1 questionable structure)
Mycoplasma hyorhinis DBS 1050
Mycoplasma hyorhinis GDL-1
Mycoplasma hyorhinis HUB-1
Mycoplasma hyorhinis MCLD
Mycoplasma hyorhinis SK76
Mycoplasma leachii 99/014/6     (1 questionable structure)
Mycoplasma leachii PG50     (6 questionable structures)
Mycoplasma mobile 163K     (1 CRISPR)
Mycoplasma mycoides subsp. capri LC str. 95010     (3 questionable structures)
Mycoplasma mycoides subsp. mycoides SC str. Gladysdale
Mycoplasma mycoides subsp. mycoides SC str. PG1
Mycoplasma ovis str. Michigan
Mycoplasma parvum str. Indiana
Mycoplasma penetrans HF-2     (1 questionable structure)
Mycoplasma pneumoniae 309     (2 questionable structures)
Mycoplasma pneumoniae FH     (2 questionable structures)
Mycoplasma pneumoniae M129     (1 CRISPR, 1 questionable structure)
Mycoplasma pneumoniae M129-B7
Mycoplasma pulmonis UAB CTIP
Mycoplasma putrefaciens KS1     (1 questionable structure)
Mycoplasma putrefaciens Mput9231
Mycoplasma suis KI_3806
Mycoplasma suis str. Illinois
Mycoplasma synoviae 53     (1 CRISPR)
Mycoplasma wenyonii str. Massachusetts
Myxococcus fulvus HW-1     (4 CRISPRs, 6 questionable structures)
Myxococcus stipitatus DSM 14675     (5 CRISPRs, 2 questionable structures)
Myxococcus xanthus DK 1622     (4 CRISPRs, 4 questionable structures)
Nakamurella multipartita DSM 44233     (7 CRISPRs, 1 questionable structure)
Natranaerobius thermophilus JW/NM-WN-LF
Nautilia profundicola AmH
Neisseria gonorrhoeae FA 1090     (3 CRISPRs, 1 questionable structure)
Neisseria gonorrhoeae NCCP11945     (8 CRISPRs, 1 questionable structure)
Neisseria gonorrhoeae TCDC-NG08107     (1 CRISPR, 5 questionable structures)
Neisseria lactamica 020-06     (6 CRISPRs, 2 questionable structures)
Neisseria meningitidis 053442     (5 CRISPRs, 3 questionable structures)
Neisseria meningitidis 8013     (8 CRISPRs, 4 questionable structures)
Neisseria meningitidis alpha14     (6 CRISPRs, 3 questionable structures)
Neisseria meningitidis alpha710     (4 CRISPRs, 3 questionable structures)
Neisseria meningitidis FAM18     (2 CRISPRs, 4 questionable structures)
Neisseria meningitidis G2136     (6 CRISPRs, 3 questionable structures)
Neisseria meningitidis H44/76     (5 CRISPRs, 4 questionable structures)
Neisseria meningitidis M01-240149     (3 CRISPRs, 4 questionable structures)
Neisseria meningitidis M01-240355     (6 CRISPRs, 2 questionable structures)
Neisseria meningitidis M04-240196     (10 CRISPRs, 4 questionable structures)
Neisseria meningitidis MC58     (2 CRISPRs, 5 questionable structures)
Neisseria meningitidis NZ-05/33     (2 CRISPRs, 3 questionable structures)
Neisseria meningitidis WUE 2594     (6 CRISPRs, 5 questionable structures)
Neisseria meningitidis Z2491     (2 CRISPRs, 4 questionable structures)
Neorickettsia risticii str. Illinois
Neorickettsia sennetsu str. Miyayama     (1 questionable structure)
Niastella koreensis GR20-10     (1 CRISPR, 2 questionable structures)
Nitratifractor salsuginis DSM 16511     (2 CRISPRs, 1 questionable structure)
Nitratiruptor sp. SB155-2
Nitrobacter hamburgensis X14     (1 questionable structure)
Nitrobacter winogradskyi Nb-255     (1 CRISPR, 2 questionable structures)
Nitrosococcus halophilus Nc4     (6 CRISPRs, 1 questionable structure)
Nitrosococcus oceani ATCC 19707     (1 CRISPR)
Nitrosococcus watsoni C-113     (1 CRISPR, 2 questionable structures)
Nitrosomonas europaea ATCC 19718     (2 CRISPRs, 1 questionable structure)
Nitrosomonas eutropha C91     (3 CRISPRs)
Nitrosomonas sp. AL212     (2 CRISPRs)
Nitrosomonas sp. Is79A3
Nitrosospira multiformis ATCC 25196
Nocardia brasiliensis ATCC 700358     (3 questionable structures)
Nocardia cyriacigeorgica GUH-2     (2 CRISPRs, 1 questionable structure)
Nocardia farcinica IFM 10152     (3 CRISPRs, 5 questionable structures)
Nocardioides sp. JS614     (34 questionable structures)
Nocardiopsis alba ATCC BAA-2165     (27 CRISPRs, 2 questionable structures)
Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111     (9 CRISPRs, 3 questionable structures)
Nonlabens dokdonensis DSW-6     (3 questionable structures)
Nostoc punctiforme PCC 73102     (6 CRISPRs, 13 questionable structures)
Nostoc sp. PCC 7107     (18 CRISPRs, 5 questionable structures)
Nostoc sp. PCC 7120     (13 CRISPRs, 5 questionable structures)
Nostoc sp. PCC 7524     (6 CRISPRs, 6 questionable structures)
Novosphingobium aromaticivorans DSM 12444
Novosphingobium sp. PP1Y
Oceanimonas sp. GK1     (2 questionable structures)
Oceanithermus profundus DSM 14977     (1 CRISPR)
Oceanobacillus iheyensis HTE831     (3 questionable structures)
Ochrobactrum anthropi ATCC 49188     (1 questionable structure)
Octadecabacter antarcticus 307
Octadecabacter arcticus 238
Odoribacter splanchnicus DSM 20712     (1 CRISPR, 5 questionable structures)
Oenococcus oeni PSU-1
Oligotropha carboxidovorans OM4
Oligotropha carboxidovorans OM5
Olsenella uli DSM 7084     (1 CRISPR, 5 questionable structures)
Onion yellows phytoplasma OY-M
Opitutus terrae PB90-1     (1 questionable structure)
Orientia tsutsugamushi Boryong     (2 questionable structures)
Orientia tsutsugamushi str. Ikeda     (2 questionable structures)
Ornithobacterium rhinotracheale DSM 15997     (2 CRISPRs, 1 questionable structure)
Oscillatoria acuminata PCC 6304     (19 CRISPRs, 32 questionable structures)
Oscillatoria nigro-viridis PCC 7112     (10 CRISPRs, 21 questionable structures)
Oscillibacter valericigenes Sjm18-20     (2 questionable structures)
Owenweeksia hongkongensis DSM 17368     (1 questionable structure)
Paenibacillus larvae subsp. larvae DSM 25430     (1 CRISPR)
Paenibacillus mucilaginosus 3016     (1 CRISPR, 10 questionable structures)
Paenibacillus mucilaginosus K02     (4 CRISPRs, 10 questionable structures)
Paenibacillus mucilaginosus KNP414     (5 questionable structures)
Paenibacillus polymyxa CR1     (4 CRISPRs)
Paenibacillus polymyxa E681     (1 CRISPR)
Paenibacillus polymyxa M1
Paenibacillus polymyxa SC2     (1 questionable structure)
Paenibacillus sp. JDR-2     (3 questionable structures)
Paenibacillus terrae HPL-003     (10 CRISPRs, 1 questionable structure)
Paludibacter propionicigenes WB4     (2 CRISPRs, 2 questionable structures)
Pandoraea pnomenusa 3kgm
Pandoraea sp. RB-44
Pantoea ananatis AJ13355     (1 CRISPR)
Pantoea ananatis LMG 20103
Pantoea ananatis LMG 5342     (1 CRISPR)
Pantoea ananatis PA13     (1 CRISPR)
Pantoea sp. At-9b     (2 questionable structures)
Pantoea vagans C9-1     (1 questionable structure)
Parabacteroides distasonis ATCC 8503     (1 CRISPR)
Parachlamydia acanthamoebae UV7
Paracoccus aminophilus JCM 7686     (2 CRISPRs)
Paracoccus denitrificans PD1222     (1 CRISPR, 2 questionable structures)
Parvibaculum lavamentivorans DS-1     (1 CRISPR)
Parvularcula bermudensis HTCC2503     (1 CRISPR)
Pasteurella multocida 36950     (2 CRISPRs)
Pasteurella multocida subsp. multocida str. 3480     (2 CRISPRs)
Pasteurella multocida subsp. multocida str. HN06     (2 CRISPRs)
Pasteurella multocida subsp. multocida str. Pm70     (4 CRISPRs)
Pectobacterium carotovorum subsp. carotovorum PC1     (2 CRISPRs)
Pectobacterium carotovorum subsp. carotovorum PCC21     (4 CRISPRs, 1 questionable structure)
Pectobacterium sp. SCC3193
Pectobacterium wasabiae WPP163     (4 CRISPRs, 2 questionable structures)
Pediococcus claussenii ATCC BAA-344
Pediococcus pentosaceus ATCC 25745
Pediococcus pentosaceus SL4     (1 CRISPR)
Pedobacter heparinus DSM 2366     (1 questionable structure)
Pedobacter saltans DSM 12145     (2 questionable structures)
Pelagibacterium halotolerans B2     (1 questionable structure)
Pelobacter carbinolicus DSM 2380     (1 CRISPR)
Pelobacter propionicus DSM 2379     (2 CRISPRs, 1 questionable structure)
Pelodictyon luteolum DSM 273     (1 CRISPR)
Pelodictyon phaeoclathratiforme BU-1     (3 CRISPRs, 2 questionable structures)
Pelotomaculum thermopropionicum SI     (5 CRISPRs)
Persephonella marina EX-H1     (5 CRISPRs)
Petrotoga mobilis SJ95     (2 CRISPRs, 1 questionable structure)
Phaeobacter gallaeciensis 2.10
Phaeobacter gallaeciensis DSM 17395
Phaeobacter gallaeciensis DSM 26640
Phenylobacterium zucineum HLK1
Photobacterium profundum SS9     (2 CRISPRs, 1 questionable structure)
Photorhabdus asymbiotica     (6 CRISPRs, 3 questionable structures)
Photorhabdus luminescens subsp. laumondii TTO1     (6 CRISPRs, 3 questionable structures)
Phycisphaera mikurensis NBRC 102666     (1 CRISPR, 4 questionable structures)
Pirellula staleyi DSM 6068     (2 CRISPRs, 3 questionable structures)
Planctomyces brasiliensis DSM 5305     (2 CRISPRs, 1 questionable structure)
Planctomyces limnophilus DSM 3776     (1 CRISPR, 1 questionable structure)
Plautia stali symbiont     (1 questionable structure)
Pleurocapsa sp. PCC 7327     (4 CRISPRs, 4 questionable structures)
Polaribacter sp. MED152
Polaromonas naphthalenivorans CJ2     (3 questionable structures)
Polaromonas sp. JS666     (7 questionable structures)
Polymorphum gilvum SL003B-26A1     (1 CRISPR)
Polynucleobacter necessarius STIR1
Polynucleobacter sp. QLW-P1DMWA-1
Porphyromonas asaccharolytica DSM 20707     (1 CRISPR, 3 questionable structures)
Porphyromonas gingivalis ATCC 33277     (4 CRISPRs, 7 questionable structures)
Porphyromonas gingivalis TDC60     (5 CRISPRs, 2 questionable structures)
Porphyromonas gingivalis W83     (4 CRISPRs, 1 questionable structure)
Prevotella dentalis DSM 3688     (1 CRISPR, 3 questionable structures)
Prevotella denticola F0289     (2 CRISPRs, 1 questionable structure)
Prevotella intermedia 17     (2 CRISPRs)
Prevotella melaninogenica ATCC 25845     (3 questionable structures)
Prevotella ruminicola 23     (1 CRISPR, 1 questionable structure)
Prevotella sp. oral taxon 299 str. F0039     (2 questionable structures)
Prochlorococcus marinus str. AS9601     (1 questionable structure)
Prochlorococcus marinus str. MIT 9211
Prochlorococcus marinus str. MIT 9215
Prochlorococcus marinus str. MIT 9301
Prochlorococcus marinus str. MIT 9303     (2 questionable structures)
Prochlorococcus marinus str. MIT 9312
Prochlorococcus marinus str. MIT 9313
Prochlorococcus marinus str. MIT 9515     (1 questionable structure)
Prochlorococcus marinus str. NATL1A
Prochlorococcus marinus str. NATL2A
Prochlorococcus marinus subsp. marinus str. CCMP1375
Prochlorococcus marinus subsp. pastoris str. CCMP1986
Propionibacterium acidipropionici ATCC 4875     (3 CRISPRs, 8 questionable structures)
Propionibacterium acnes 266     (1 questionable structure)
Propionibacterium acnes 6609
Propionibacterium acnes ATCC 11828
Propionibacterium acnes C1     (1 questionable structure)
Propionibacterium acnes HL096PA1
Propionibacterium acnes KPA171202
Propionibacterium acnes SK137
Propionibacterium acnes TypeIA2 P.acn17     (1 questionable structure)
Propionibacterium acnes TypeIA2 P.acn31     (1 questionable structure)
Propionibacterium acnes TypeIA2 P.acn33     (1 questionable structure)
Propionibacterium avidum 44067
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1     (1 CRISPR)
Propionibacterium propionicum F0230a     (2 CRISPRs, 3 questionable structures)
Prosthecochloris aestuarii DSM 271     (5 CRISPRs, 1 questionable structure)
Prosthecochloris vibrioformis DSM 265     (2 CRISPRs)
Proteus mirabilis
Proteus mirabilis BB2000
Proteus mirabilis HI4320
Providencia stuartii MRSN 2154     (3 CRISPRs, 4 questionable structures)
Pseudanabaena sp. PCC 7367     (9 CRISPRs)
Pseudoalteromonas atlantica T6c     (1 questionable structure)
Pseudoalteromonas haloplanktis TAC125     (1 questionable structure)
Pseudoalteromonas sp. SM9913     (1 questionable structure)
Pseudogulbenkiania sp. NH8B     (1 CRISPR)
Pseudomonas aeruginosa B136-33
Pseudomonas aeruginosa c7447m     (1 questionable structure)
Pseudomonas aeruginosa DK2     (3 CRISPRs)
Pseudomonas aeruginosa LES431     (1 CRISPR)
Pseudomonas aeruginosa LESB58     (1 CRISPR)
Pseudomonas aeruginosa M18     (3 CRISPRs)
Pseudomonas aeruginosa MTB-1     (1 questionable structure)
Pseudomonas aeruginosa NCGM2.S1     (1 questionable structure)
Pseudomonas aeruginosa PA1     (1 questionable structure)
Pseudomonas aeruginosa PA1R     (1 questionable structure)
Pseudomonas aeruginosa PA7     (2 CRISPRs, 1 questionable structure)
Pseudomonas aeruginosa PAO1
Pseudomonas aeruginosa PAO1-VE13
Pseudomonas aeruginosa RP73     (2 CRISPRs)
Pseudomonas aeruginosa SCV20265     (5 CRISPRs)
Pseudomonas aeruginosa UCBPP-PA14     (2 CRISPRs)
Pseudomonas brassicacearum subsp. brassicacearum NFM421     (1 questionable structure)
Pseudomonas denitrificans ATCC 13867
Pseudomonas entomophila L48     (1 questionable structure)
Pseudomonas fluorescens A506     (5 questionable structures)
Pseudomonas fluorescens F113     (3 questionable structures)
Pseudomonas fluorescens Pf-5     (2 questionable structures)
Pseudomonas fluorescens PfO-1
Pseudomonas fluorescens R124
Pseudomonas fluorescens SBW25
Pseudomonas fulva 12-X     (1 CRISPR)
Pseudomonas mendocina NK-01
Pseudomonas mendocina ymp     (2 CRISPRs)
Pseudomonas monteilii SB3078     (1 questionable structure)
Pseudomonas monteilii SB3101     (1 questionable structure)
Pseudomonas poae RE*1-1-14     (3 questionable structures)
Pseudomonas protegens CHA0
Pseudomonas putida BIRD-1     (2 questionable structures)
Pseudomonas putida DOT-T1E     (1 questionable structure)
Pseudomonas putida F1     (1 questionable structure)
Pseudomonas putida GB-1
Pseudomonas putida H8234
Pseudomonas putida HB3267     (2 questionable structures)
Pseudomonas putida KT2440     (2 questionable structures)
Pseudomonas putida NBRC 14164
Pseudomonas putida ND6
Pseudomonas putida S16     (1 questionable structure)
Pseudomonas putida W619     (1 questionable structure)
Pseudomonas resinovorans NBRC 106553
Pseudomonas sp. TKP     (2 questionable structures)
Pseudomonas sp. UW4
Pseudomonas sp. VLB120
Pseudomonas stutzeri A1501     (1 CRISPR)
Pseudomonas stutzeri ATCC 17588 = LMG 11199     (1 questionable structure)
Pseudomonas stutzeri CCUG 29243
Pseudomonas stutzeri DSM 10701
Pseudomonas stutzeri DSM 4166
Pseudomonas stutzeri RCH2
Pseudomonas syringae pv. phaseolicola 1448A     (2 questionable structures)
Pseudomonas syringae pv. syringae B728a     (1 questionable structure)
Pseudomonas syringae pv. tomato str. DC3000
Pseudonocardia dioxanivorans CB1190     (6 questionable structures)
Pseudovibrio sp. FO-BEG1
Pseudoxanthomonas spadix BD-a59     (1 CRISPR, 4 questionable structures)
Pseudoxanthomonas suwonensis 11-1     (1 questionable structure)
Psychrobacter arcticus 273-4     (1 questionable structure)
Psychrobacter cryohalolentis K5
Psychrobacter sp. G     (1 CRISPR, 1 questionable structure)
Psychrobacter sp. PRwf-1     (1 CRISPR)
Psychroflexus torquis ATCC 700755     (3 CRISPRs, 1 questionable structure)
Psychromonas ingrahamii 37     (1 CRISPR, 22 questionable structures)
Psychromonas sp. CNPT3
Pusillimonas sp. T7-7     (2 questionable structures)
Rahnella aquatilis CIP 78.65 = ATCC 33071     (3 CRISPRs)
Rahnella aquatilis HX2     (1 CRISPR, 2 questionable structures)
Rahnella sp. Y9602     (1 CRISPR)
Ralstonia eutropha H16
Ralstonia eutropha JMP134
Ralstonia metallidurans CH34     (1 questionable structure)
Ralstonia pickettii 12D
Ralstonia pickettii 12J
Ralstonia solanacearum
Ralstonia solanacearum CFBP2957     (2 CRISPRs, 1 questionable structure)
Ralstonia solanacearum CMR15
Ralstonia solanacearum FQY_4
Ralstonia solanacearum GMI1000
Ralstonia solanacearum Po82     (2 CRISPRs)
Ralstonia solanacearum PSI07     (2 questionable structures)
Ramlibacter tataouinensis TTB310     (3 CRISPRs)
Raoultella ornithinolytica B6
Renibacterium salmoninarum ATCC 33209
Rhizobium etli bv. mimosae str. Mim1
Rhizobium etli CFN 42
Rhizobium etli CIAT 652
Rhizobium leguminosarum bv. trifolii WSM1325     (1 questionable structure)
Rhizobium leguminosarum bv. trifolii WSM2304     (1 questionable structure)
Rhizobium leguminosarum bv. viciae 3841     (3 questionable structures)
Rhizobium sp. IRBG74     (1 questionable structure)
Rhizobium sp. NGR234
Rhizobium tropici CIAT 899
Rhodanobacter sp. 2APBS1
Rhodobacter capsulatus SB 1003     (6 CRISPRs)
Rhodobacter sphaeroides 2.4.1     (1 questionable structure)
Rhodobacter sphaeroides ATCC 17025     (1 questionable structure)
Rhodobacter sphaeroides ATCC 17029     (1 questionable structure)
Rhodobacter sphaeroides KD131     (1 CRISPR, 2 questionable structures)
Rhodococcus equi 103S     (2 questionable structures)
Rhodococcus erythropolis CCM2595     (4 questionable structures)
Rhodococcus erythropolis PR4     (3 questionable structures)
Rhodococcus opacus B4
Rhodococcus pyridinivorans SB3094
Rhodococcus sp. RHA1
Rhodoferax ferrireducens T118     (2 CRISPRs, 4 questionable structures)
Rhodomicrobium vannielii ATCC 17100     (4 CRISPRs)
Rhodopirellula baltica SH 1     (1 questionable structure)
Rhodopseudomonas palustris BisA53     (2 questionable structures)
Rhodopseudomonas palustris BisB18     (1 CRISPR, 1 questionable structure)
Rhodopseudomonas palustris BisB5     (1 CRISPR, 1 questionable structure)
Rhodopseudomonas palustris CGA009     (1 questionable structure)
Rhodopseudomonas palustris DX-1     (1 CRISPR, 1 questionable structure)
Rhodopseudomonas palustris HaA2     (2 questionable structures)
Rhodopseudomonas palustris TIE-1
Rhodospirillum centenum SW     (7 CRISPRs, 1 questionable structure)
Rhodospirillum photometricum DSM 122     (4 CRISPRs)
Rhodospirillum rubrum ATCC 11170     (12 CRISPRs, 2 questionable structures)
Rhodospirillum rubrum F11     (12 CRISPRs, 2 questionable structures)
Rhodothermus marinus DSM 4252     (10 CRISPRs, 3 questionable structures)
Rhodothermus marinus SG0.5JP17-172     (11 CRISPRs, 3 questionable structures)
Rickettsia africae ESF-5
Rickettsia akari str. Hartford
Rickettsia australis str. Cutlack
Rickettsia bellii OSU 85-389     (1 questionable structure)
Rickettsia bellii RML369-C     (2 questionable structures)
Rickettsia canadensis str. CA410
Rickettsia canadensis str. McKiel
Rickettsia conorii str. Malish 7     (1 questionable structure)
Rickettsia felis URRWXCal2
Rickettsia heilongjiangensis 054     (1 questionable structure)
Rickettsia japonica YH
Rickettsia massiliae MTU5
Rickettsia massiliae str. AZT80
Rickettsia montanensis str. OSU 85-930
Rickettsia parkeri str. Portsmouth
Rickettsia peacockii str. Rustic
Rickettsia philipii str. 364D
Rickettsia prowazekii Rp22
Rickettsia prowazekii str. Breinl
Rickettsia prowazekii str. BuV67-CWPP
Rickettsia prowazekii str. Chernikova
Rickettsia prowazekii str. Dachau
Rickettsia prowazekii str. GvV257
Rickettsia prowazekii str. Katsinyian
Rickettsia prowazekii str. Madrid E
Rickettsia prowazekii str. NMRC Madrid E
Rickettsia prowazekii str. RpGvF24
Rickettsia rhipicephali str. 3-7-female6-CWPP
Rickettsia rickettsii str. 'Sheila Smith'
Rickettsia rickettsii str. Arizona
Rickettsia rickettsii str. Brazil     (1 questionable structure)
Rickettsia rickettsii str. Colombia     (1 questionable structure)
Rickettsia rickettsii str. Hauke
Rickettsia rickettsii str. Hino
Rickettsia rickettsii str. Hlp#2
Rickettsia rickettsii str. Iowa
Rickettsia slovaca 13-B
Rickettsia slovaca str. D-CWPP
Rickettsia typhi str. B9991CWPP
Rickettsia typhi str. TH1527
Rickettsia typhi str. Wilmington
Riemerella anatipestifer DSM 15868     (5 CRISPRs, 3 questionable structures)
Riemerella anatipestifer RA-CH-1     (1 CRISPR)
Riemerella anatipestifer RA-CH-2     (2 CRISPRs)
Riemerella anatipestifer RA-GD     (3 CRISPRs)
Rivularia sp. PCC 7116     (16 CRISPRs, 8 questionable structures)
Robiginitalea biformata HTCC2501     (2 questionable structures)
Roseburia hominis A2-183     (1 CRISPR, 7 questionable structures)
Roseburia intestinalis M50/1
Roseburia intestinalis XB6B4
Roseiflexus castenholzii DSM 13941     (7 CRISPRs, 35 questionable structures)
Roseiflexus sp. RS-1     (14 CRISPRs, 23 questionable structures)
Roseobacter denitrificans OCh 114
Roseobacter litoralis Och 149
Rothia dentocariosa ATCC 17931     (2 CRISPRs, 1 questionable structure)
Rothia mucilaginosa DY-18     (2 CRISPRs, 7 questionable structures)
Rubrivivax gelatinosus IL144     (2 CRISPRs, 1 questionable structure)
Rubrobacter xylanophilus DSM 9941     (4 CRISPRs, 1 questionable structure)
Ruminococcus albus 7     (4 CRISPRs, 4 questionable structures)
Ruminococcus bromii L2-63
Ruminococcus champanellensis 18P13
Ruminococcus obeum A2-162
Ruminococcus sp. SR1/5
Ruminococcus torques L2-14
Runella slithyformis DSM 19594     (2 CRISPRs, 1 questionable structure)
Saccharomonospora viridis DSM 43017     (10 CRISPRs)
Saccharophagus degradans 2-40     (1 questionable structure)
Saccharopolyspora erythraea NRRL 2338     (4 CRISPRs, 3 questionable structures)
Saccharothrix espanaensis DSM 44229     (4 CRISPRs, 5 questionable structures)
Salinibacter ruber
Salinibacter ruber DSM 13855
Salinibacter ruber M8
Salinispora arenicola CNS-205     (8 CRISPRs)
Salinispora tropica CNB-440     (3 CRISPRs)
Salmonella bongori N268-08     (2 CRISPRs)
Salmonella bongori NCTC 12419     (2 CRISPRs)
Salmonella enterica subsp. arizonae serovar 62:z4,z23:--     (1 questionable structure)
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Agona str. 24249     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Agona str. SL483     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Bovismorbificans str. 3114     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Heidelberg str. 41578     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Heidelberg str. B182     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Newport str. SL254     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601     (2 CRISPRs, 1 questionable structure)
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150     (2 CRISPRs, 1 questionable structure)
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7     (2 CRISPRs, 1 questionable structure)
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Pullorum str. S06004     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Thompson str. RM6836     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Typhi str. CT18     (1 CRISPR)
Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12     (1 CRISPR)
Salmonella enterica subsp. enterica serovar Typhi str. Ty21a
Salmonella enterica subsp. enterica serovar Typhi Ty2     (1 CRISPR)
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Typhimurium str. 798     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Typhimurium str. DT104     (2 CRISPRs)
Salmonella enterica subsp. enterica serovar Typhimurium str. DT2     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Typhimurium str. U288
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1     (3 CRISPRs)
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921     (3 CRISPRs)
Salmonella typhimurium LT2     (3 CRISPRs)
Sanguibacter keddieii DSM 10542     (2 questionable structures)
Saprospira grandis str. Lewin     (3 CRISPRs, 5 questionable structures)
Sebaldella termitidis ATCC 33386     (4 CRISPRs, 2 questionable structures)
secondary endosymbiont of Ctenarytaina eucalypti
secondary endosymbiont of Heteropsylla cubana
Segniliparus rotundus DSM 44985     (3 questionable structures)
Selenomonas ruminantium subsp. lactilytica TAM6421     (1 CRISPR, 2 questionable structures)
Selenomonas sputigena ATCC 35185     (4 CRISPRs, 1 questionable structure)
Serratia liquefaciens ATCC 27592
Serratia marcescens FGI94     (4 CRISPRs)
Serratia marcescens WW4
Serratia plymuthica 4Rx13
Serratia plymuthica S13
Serratia proteamaculans 568     (1 questionable structure)
Serratia sp. AS12     (1 CRISPR, 1 questionable structure)
Serratia sp. AS13     (1 CRISPR, 1 questionable structure)
Serratia sp. AS9     (1 CRISPR, 1 questionable structure)
Serratia sp. ATCC 39006     (6 CRISPRs, 1 questionable structure)
Serratia symbiotica str. 'Cinara cedri'
Shewanella amazonensis SB2B     (4 questionable structures)
Shewanella baltica BA175
Shewanella baltica OS117     (1 CRISPR, 4 questionable structures)
Shewanella baltica OS155     (2 questionable structures)
Shewanella baltica OS185     (1 CRISPR)
Shewanella baltica OS195     (1 CRISPR, 1 questionable structure)
Shewanella baltica OS223
Shewanella baltica OS678     (1 CRISPR, 1 questionable structure)
Shewanella denitrificans OS217
Shewanella frigidimarina NCIMB 400
Shewanella halifaxensis HAW-EB4     (1 questionable structure)
Shewanella loihica PV-4     (1 questionable structure)
Shewanella oneidensis MR-1     (3 questionable structures)
Shewanella pealeana ATCC 700345     (3 questionable structures)
Shewanella piezotolerans WP3     (1 CRISPR)
Shewanella putrefaciens 200     (3 CRISPRs)
Shewanella putrefaciens CN-32     (1 CRISPR, 1 questionable structure)
Shewanella sediminis HAW-EB3     (2 questionable structures)
Shewanella sp. ANA-3     (1 CRISPR)
Shewanella sp. MR-4     (1 questionable structure)
Shewanella sp. MR-7
Shewanella sp. W3-18-1     (2 CRISPRs, 5 questionable structures)
Shewanella violacea DSS12     (1 CRISPR, 3 questionable structures)
Shewanella woodyi ATCC 51908     (2 questionable structures)
Shigella boydii CDC 3083-94     (1 questionable structure)
Shigella boydii Sb227     (1 CRISPR, 1 questionable structure)
Shigella dysenteriae 1617     (8 CRISPRs, 29 questionable structures)
Shigella dysenteriae Sd197     (1 questionable structure)
Shigella flexneri 2002017     (1 CRISPR, 1 questionable structure)
Shigella flexneri 2a str. 2457T     (1 CRISPR, 1 questionable structure)
Shigella flexneri 2a str. 301     (1 CRISPR, 1 questionable structure)
Shigella flexneri 5 str. 8401     (1 CRISPR, 2 questionable structures)
Shigella sonnei
Shigella sonnei 53G     (2 CRISPRs, 2 questionable structures)
Shigella sonnei Ss046     (2 CRISPRs, 2 questionable structures)
Sideroxydans lithotrophicus ES-1     (1 questionable structure)
Silicibacter pomeroyi DSS-3
Silicibacter sp. TM1040
Simiduia agarivorans SA1 = DSM 21679     (1 questionable structure)
Simkania negevensis Z
Singulisphaera acidiphila DSM 18658     (7 CRISPRs, 4 questionable structures)
Sinorhizobium fredii HH103
Sinorhizobium fredii USDA 257     (2 questionable structures)
Sinorhizobium medicae WSM419
Sinorhizobium meliloti 1021     (1 questionable structure)
Sinorhizobium meliloti 2011
Sinorhizobium meliloti AK83
Sinorhizobium meliloti BL225C     (1 questionable structure)
Sinorhizobium meliloti GR4
Sinorhizobium meliloti Rm41     (1 questionable structure)
Sinorhizobium meliloti SM11     (1 questionable structure)
Slackia heliotrinireducens DSM 20476     (2 questionable structures)
Sodalis glossinidius str. 'morsitans'     (1 questionable structure)
Solibacillus silvestris StLB046     (1 questionable structure)
Solibacter usitatus Ellin6076     (3 questionable structures)
Solitalea canadensis DSM 3403     (4 questionable structures)
Sorangium cellulosum 'So ce 56'     (5 CRISPRs, 9 questionable structures)
Sorangium cellulosum So0157-2     (3 CRISPRs, 21 questionable structures)
Sphaerobacter thermophilus DSM 20745     (1 CRISPR, 5 questionable structures)
Sphaerochaeta pleomorpha str. Grapes     (1 CRISPR)
Sphingobacterium sp. 21     (3 CRISPRs, 3 questionable structures)
Sphingobium chlorophenolicum L-1
Sphingobium japonicum UT26S
Sphingobium sp. SYK-6     (1 CRISPR)
Sphingomonas sp. MM-1
Sphingomonas wittichii RW1     (1 questionable structure)
Sphingopyxis alaskensis RB2256
Spiribacter salinus M19-40
Spiribacter sp. UAH-SP71
Spirochaeta africana DSM 8902     (1 CRISPR, 2 questionable structures)
Spirochaeta caldaria DSM 7334     (2 CRISPRs, 1 questionable structure)
Spirochaeta coccoides DSM 17374     (2 CRISPRs, 1 questionable structure)
Spirochaeta smaragdinae DSM 11293     (1 CRISPR)
Spirochaeta sp. Buddy     (1 CRISPR, 1 questionable structure)
Spirochaeta sp. L21-RPul-D2     (3 CRISPRs)
Spirochaeta thermophila DSM 6192     (1 CRISPR, 2 questionable structures)
Spirochaeta thermophila DSM 6578     (2 CRISPRs)
Spiroplasma apis B31     (1 CRISPR)
Spiroplasma chrysopicola DF-1
Spiroplasma diminutum CUAS-1     (1 questionable structure)
Spiroplasma syrphidicola EA-1
Spiroplasma taiwanense CT-1
Spirosoma linguale DSM 74     (1 CRISPR, 2 questionable structures)
Stackebrandtia nassauensis DSM 44728     (3 CRISPRs, 4 questionable structures)
Stanieria cyanosphaera PCC 7437     (5 CRISPRs, 2 questionable structures)
Staphylococcus aureus
Staphylococcus aureus 04-02981     (2 CRISPRs, 7 questionable structures)
Staphylococcus aureus 08BA02176     (1 CRISPR, 7 questionable structures)
Staphylococcus aureus Bmb9393     (1 CRISPR, 5 questionable structures)
Staphylococcus aureus CA-347
Staphylococcus aureus M1
Staphylococcus aureus PM1
Staphylococcus aureus RF122     (5 questionable structures)
Staphylococcus aureus subsp. aureus
Staphylococcus aureus subsp. aureus 11819-97     (6 questionable structures)
Staphylococcus aureus subsp. aureus 55/2053     (6 questionable structures)
Staphylococcus aureus subsp. aureus 6850     (5 questionable structures)
Staphylococcus aureus subsp. aureus 71193     (1 CRISPR, 6 questionable structures)
Staphylococcus aureus subsp. aureus CN1     (2 CRISPRs, 3 questionable structures)
Staphylococcus aureus subsp. aureus COL     (2 CRISPRs, 3 questionable structures)
Staphylococcus aureus subsp. aureus ECT-R 2     (2 CRISPRs, 5 questionable structures)
Staphylococcus aureus subsp. aureus ED133     (1 CRISPR, 6 questionable structures)
Staphylococcus aureus subsp. aureus ED98     (2 CRISPRs, 7 questionable structures)
Staphylococcus aureus subsp. aureus HO 5096 0412     (1 CRISPR, 4 questionable structures)
Staphylococcus aureus subsp. aureus JH1     (2 CRISPRs, 6 questionable structures)
Staphylococcus aureus subsp. aureus JH9     (2 CRISPRs, 6 questionable structures)
Staphylococcus aureus subsp. aureus JKD6159     (5 questionable structures)
Staphylococcus aureus subsp. aureus LGA251     (1 CRISPR, 4 questionable structures)
Staphylococcus aureus subsp. aureus M013     (1 CRISPR, 4 questionable structures)
Staphylococcus aureus subsp. aureus MRSA252     (1 CRISPR, 3 questionable structures)
Staphylococcus aureus subsp. aureus MSHR1132     (2 CRISPRs, 2 questionable structures)
Staphylococcus aureus subsp. aureus MSSA476     (1 CRISPR, 9 questionable structures)
Staphylococcus aureus subsp. aureus Mu3     (2 CRISPRs, 6 questionable structures)
Staphylococcus aureus subsp. aureus Mu50     (2 CRISPRs, 6 questionable structures)
Staphylococcus aureus subsp. aureus MW2     (2 CRISPRs, 7 questionable structures)
Staphylococcus aureus subsp. aureus N315     (2 CRISPRs, 7 questionable structures)
Staphylococcus aureus subsp. aureus NCTC 8325     (1 CRISPR, 2 questionable structures)
Staphylococcus aureus subsp. aureus S0385     (1 CRISPR, 5 questionable structures)
Staphylococcus aureus subsp. aureus SA40     (1 CRISPR, 4 questionable structures)
Staphylococcus aureus subsp. aureus SA957     (1 CRISPR, 4 questionable structures)
Staphylococcus aureus subsp. aureus ST228
Staphylococcus aureus subsp. aureus ST398
Staphylococcus aureus subsp. aureus str. JKD6008     (7 questionable structures)
Staphylococcus aureus subsp. aureus str. Newman     (1 CRISPR, 3 questionable structures)
Staphylococcus aureus subsp. aureus T0131     (1 CRISPR, 4 questionable structures)
Staphylococcus aureus subsp. aureus TCH60     (7 questionable structures)
Staphylococcus aureus subsp. aureus TW20     (1 CRISPR, 3 questionable structures)
Staphylococcus aureus subsp. aureus USA300     (1 CRISPR, 2 questionable structures)
Staphylococcus aureus subsp. aureus USA300_TCH1516     (1 CRISPR, 3 questionable structures)
Staphylococcus aureus subsp. aureus VC40     (1 CRISPR, 2 questionable structures)
Staphylococcus aureus subsp. aureus Z172     (2 CRISPRs, 3 questionable structures)
Staphylococcus carnosus subsp. carnosus TM300
Staphylococcus epidermidis ATCC 12228     (1 questionable structure)
Staphylococcus epidermidis RP62A     (1 CRISPR, 1 questionable structure)
Staphylococcus haemolyticus JCSC1435     (1 questionable structure)
Staphylococcus lugdunensis HKU09-01     (1 CRISPR, 4 questionable structures)
Staphylococcus lugdunensis N920143     (1 CRISPR, 4 questionable structures)
Staphylococcus pasteuri SP1     (2 CRISPRs, 1 questionable structure)
Staphylococcus pseudintermedius ED99     (1 CRISPR)
Staphylococcus pseudintermedius HKU10-03
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305
Staphylococcus warneri SG1     (1 questionable structure)
Starkeya novella DSM 506     (1 questionable structure)
Stenotrophomonas maltophilia D457
Stenotrophomonas maltophilia JV3     (1 questionable structure)
Stenotrophomonas maltophilia K279a     (4 questionable structures)
Stenotrophomonas maltophilia R551-3     (6 questionable structures)
Stigmatella aurantiaca DW4/3-1     (4 questionable structures)
Strawberry lethal yellows phytoplasma (CPA) str. NZSb11
Streptobacillus moniliformis DSM 12112     (1 CRISPR)
Streptococcus agalactiae
Streptococcus agalactiae 09mas018883
Streptococcus agalactiae 2603V/R     (1 CRISPR)
Streptococcus agalactiae A909     (1 CRISPR)
Streptococcus agalactiae GD201008-001     (1 CRISPR)
Streptococcus agalactiae ILRI005
Streptococcus agalactiae ILRI112
Streptococcus agalactiae NEM316     (1 CRISPR, 1 questionable structure)
Streptococcus agalactiae SA20-06     (1 CRISPR)
Streptococcus anginosus C1051     (3 CRISPRs, 2 questionable structures)
Streptococcus anginosus C238
Streptococcus constellatus subsp. pharyngis C1050
Streptococcus constellatus subsp. pharyngis C232
Streptococcus constellatus subsp. pharyngis C818
Streptococcus dysgalactiae subsp. equisimilis 167     (1 questionable structure)
Streptococcus dysgalactiae subsp. equisimilis AC-2713     (3 CRISPRs)
Streptococcus dysgalactiae subsp. equisimilis ATCC 12394     (2 CRISPRs)
Streptococcus dysgalactiae subsp. equisimilis GGS_124     (1 CRISPR)
Streptococcus dysgalactiae subsp. equisimilis RE378     (2 CRISPRs, 2 questionable structures)
Streptococcus equi subsp. equi 4047     (3 questionable structures)
Streptococcus equi subsp. zooepidemicus     (1 CRISPR, 2 questionable structures)
Streptococcus equi subsp. zooepidemicus ATCC 35246     (1 CRISPR)
Streptococcus equi subsp. zooepidemicus MGCS10565     (2 CRISPRs, 2 questionable structures)
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143     (2 CRISPRs)
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069     (2 CRISPRs, 1 questionable structure)
Streptococcus gallolyticus UCN34     (2 CRISPRs)
Streptococcus gordonii str. Challis substr. CH1     (1 CRISPR, 1 questionable structure)
Streptococcus infantarius subsp. infantarius CJ18     (1 CRISPR)
Streptococcus iniae SF1
Streptococcus intermedius B196     (1 CRISPR)
Streptococcus intermedius C270     (1 questionable structure)
Streptococcus intermedius JTH08
Streptococcus lutetiensis 033     (2 CRISPRs)
Streptococcus macedonicus
Streptococcus macedonicus ACA-DC 198     (1 CRISPR)
Streptococcus mitis B6     (1 questionable structure)
Streptococcus mutans GS-5     (3 CRISPRs)
Streptococcus mutans LJ23     (2 CRISPRs)
Streptococcus mutans NN2025     (2 CRISPRs)
Streptococcus mutans UA159     (1 CRISPR)
Streptococcus oligofermentans AS 1.3089
Streptococcus oralis Uo5     (1 CRISPR)
Streptococcus parasanguinis ATCC 15912     (1 CRISPR, 2 questionable structures)
Streptococcus parasanguinis FW213     (1 questionable structure)
Streptococcus parauberis KCTC 11537
Streptococcus pasteurianus ATCC 43144     (1 CRISPR)
Streptococcus phage YMC-2011
Streptococcus pneumoniae 670-6B     (1 questionable structure)
Streptococcus pneumoniae 70585     (1 questionable structure)
Streptococcus pneumoniae A026     (2 questionable structures)
Streptococcus pneumoniae AP200
Streptococcus pneumoniae ATCC 700669     (1 questionable structure)
Streptococcus pneumoniae CGSP14
Streptococcus pneumoniae D39     (1 questionable structure)
Streptococcus pneumoniae G54
Streptococcus pneumoniae gamPNI0373     (1 questionable structure)
Streptococcus pneumoniae Hungary19A-6
Streptococcus pneumoniae INV104
Streptococcus pneumoniae INV200
Streptococcus pneumoniae JJA     (1 questionable structure)
Streptococcus pneumoniae OXC141
Streptococcus pneumoniae P1031     (1 questionable structure)
Streptococcus pneumoniae R6     (1 questionable structure)
Streptococcus pneumoniae SPN032672
Streptococcus pneumoniae SPN033038
Streptococcus pneumoniae SPN034156
Streptococcus pneumoniae SPN034183
Streptococcus pneumoniae SPN994038
Streptococcus pneumoniae SPN994039
Streptococcus pneumoniae SPNA45
Streptococcus pneumoniae ST556     (2 questionable structures)
Streptococcus pneumoniae Taiwan19F-14     (2 questionable structures)
Streptococcus pneumoniae TCH8431/19A     (2 questionable structures)
Streptococcus pneumoniae TIGR4
Streptococcus pseudopneumoniae IS7493
Streptococcus pyogenes A20     (2 CRISPRs)
Streptococcus pyogenes Alab49
Streptococcus pyogenes HSC5
Streptococcus pyogenes M1 476
Streptococcus pyogenes M1 GAS     (2 CRISPRs)
Streptococcus pyogenes MGAS10270     (2 CRISPRs)
Streptococcus pyogenes MGAS10394
Streptococcus pyogenes MGAS10750     (1 CRISPR)
Streptococcus pyogenes MGAS15252     (1 CRISPR)
Streptococcus pyogenes MGAS1882     (1 CRISPR)
Streptococcus pyogenes MGAS2096     (1 CRISPR)
Streptococcus pyogenes MGAS315
Streptococcus pyogenes MGAS5005     (2 CRISPRs)
Streptococcus pyogenes MGAS6180     (2 CRISPRs, 1 questionable structure)
Streptococcus pyogenes MGAS8232
Streptococcus pyogenes MGAS9429     (1 CRISPR)
Streptococcus pyogenes NZ131     (2 CRISPRs)
Streptococcus pyogenes SSI-1
Streptococcus pyogenes str. Manfredo     (2 questionable structures)
Streptococcus salivarius 57.I     (1 CRISPR, 2 questionable structures)
Streptococcus salivarius CCHSS3     (1 CRISPR, 1 questionable structure)
Streptococcus salivarius JIM8777     (1 CRISPR)
Streptococcus sanguinis SK36     (3 CRISPRs, 1 questionable structure)
Streptococcus sp. I-G2     (1 CRISPR, 2 questionable structures)
Streptococcus sp. I-P16
Streptococcus suis 05ZYH33     (1 questionable structure)
Streptococcus suis 98HAH33     (1 questionable structure)
Streptococcus suis A7     (1 questionable structure)
Streptococcus suis BM407     (1 questionable structure)
Streptococcus suis D12     (1 CRISPR, 3 questionable structures)
Streptococcus suis D9
Streptococcus suis GZ1     (1 questionable structure)
Streptococcus suis JS14
Streptococcus suis P1/7     (1 questionable structure)
Streptococcus suis S735     (3 questionable structures)
Streptococcus suis SC070731
Streptococcus suis SC84     (1 questionable structure)
Streptococcus suis SS12
Streptococcus suis ST1
Streptococcus suis ST3     (1 CRISPR, 1 questionable structure)
Streptococcus suis T15     (2 questionable structures)
Streptococcus suis TL13
Streptococcus thermophilus CNRZ1066     (1 CRISPR)
Streptococcus thermophilus JIM 8232     (3 CRISPRs)
Streptococcus thermophilus LMD-9     (3 CRISPRs, 1 questionable structure)
Streptococcus thermophilus LMG 18311     (2 CRISPRs)
Streptococcus thermophilus MN-ZLW-002     (3 CRISPRs)
Streptococcus thermophilus ND03     (3 CRISPRs)
Streptococcus uberis 0140J
Streptomyces albus J1074
Streptomyces avermitilis MA-4680     (3 CRISPRs, 4 questionable structures)
Streptomyces bingchenggensis BCW-1     (3 CRISPRs, 7 questionable structures)
Streptomyces cattleya NRRL 8057     (2 CRISPRs, 8 questionable structures)
Streptomyces coelicolor A3(2)     (1 CRISPR, 2 questionable structures)
Streptomyces collinus Tu 365     (4 questionable structures)
Streptomyces davawensis JCM 4913
Streptomyces flavogriseus ATCC 33331     (4 CRISPRs, 2 questionable structures)
Streptomyces fulvissimus DSM 40593
Streptomyces griseus subsp. griseus NBRC 13350     (3 CRISPRs, 7 questionable structures)
Streptomyces hygroscopicus subsp. jinggangensis 5008     (9 CRISPRs, 4 questionable structures)
Streptomyces hygroscopicus subsp. jinggangensis TL01
Streptomyces rapamycinicus NRRL 5491     (10 CRISPRs, 4 questionable structures)
Streptomyces scabiei 87.22     (2 questionable structures)
Streptomyces sp. PAMC26508
Streptomyces sp. SirexAA-E     (4 questionable structures)
Streptomyces venezuelae ATCC 10712     (6 questionable structures)
Streptomyces violaceusniger Tu 4113     (5 CRISPRs, 12 questionable structures)
Streptosporangium roseum DSM 43021
Sulfobacillus acidophilus DSM 10332     (2 CRISPRs)
Sulfobacillus acidophilus TPY     (2 CRISPRs)
Sulfolobus acidocaldarius SUSAZ     (2 CRISPRs, 2 questionable structures)
Sulfuricella denitrificans skB26     (1 questionable structure)
Sulfuricurvum kujiense DSM 16994
Sulfurihydrogenibium azorense Az-Fu1     (13 CRISPRs)
Sulfurihydrogenibium sp. YO3AOP1     (3 CRISPRs, 3 questionable structures)
Sulfurimonas autotrophica DSM 16294
Sulfurospirillum barnesii SES-3     (1 CRISPR)
Sulfurospirillum deleyianum DSM 6946     (1 CRISPR, 2 questionable structures)
Sulfurovum sp. NBC37-1     (3 questionable structures)
Symbiobacterium thermophilum IAM 14863     (3 CRISPRs)
Synechococcus elongatus PCC 6301
Synechococcus elongatus PCC 7942
Synechococcus sp. CC9311
Synechococcus sp. CC9605
Synechococcus sp. CC9902     (1 questionable structure)
Synechococcus sp. JA-2-3B'a(2-13)     (6 CRISPRs, 4 questionable structures)
Synechococcus sp. JA-3-3Ab     (9 CRISPRs, 1 questionable structure)
Synechococcus sp. PCC 6312     (3 CRISPRs)
Synechococcus sp. PCC 7002     (3 CRISPRs)
Synechococcus sp. PCC 7502     (1 CRISPR, 1 questionable structure)
Synechococcus sp. RCC307
Synechococcus sp. WH 7803
Synechococcus sp. WH 8102
Synechocystis sp. PCC 6803     (3 CRISPRs)
Synechocystis sp. PCC 6803 substr. GT-I
Synechocystis sp. PCC 6803 substr. PCC-N
Synechocystis sp. PCC 6803 substr. PCC-P
Synergistetes bacterium SGP1
Syntrophobacter fumaroxidans MPOB     (2 CRISPRs, 10 questionable structures)
Syntrophobotulus glycolicus DSM 8271     (3 CRISPRs)
Syntrophomonas wolfei subsp. wolfei str. Goettingen     (5 CRISPRs, 1 questionable structure)
Syntrophothermus lipocalidus DSM 12680     (2 CRISPRs, 1 questionable structure)
Syntrophus aciditrophicus SB     (2 CRISPRs, 1 questionable structure)
Tannerella forsythia ATCC 43037     (1 CRISPR, 3 questionable structures)
Taylorella asinigenitalis 14/45
Taylorella asinigenitalis MCE3     (1 CRISPR, 1 questionable structure)
Taylorella equigenitalis 14/56
Taylorella equigenitalis ATCC 35865     (1 CRISPR)
Taylorella equigenitalis MCE9
Tepidanaerobacter acetatoxydans Re1     (5 CRISPRs, 2 questionable structures)
Tepidanaerobacter sp. Re1     (5 CRISPRs, 2 questionable structures)
Teredinibacter turnerae T7901     (2 CRISPRs, 1 questionable structure)
Terriglobus roseus DSM 18391     (1 questionable structure)
Terriglobus saanensis SP1PR4
Tetragenococcus halophilus NBRC 12172     (1 questionable structure)
Thalassolituus oleivorans MIL-1
Thauera sp. MZ1T     (1 CRISPR, 4 questionable structures)
Thermacetogenium phaeum DSM 12270     (11 CRISPRs, 1 questionable structure)
Thermaerobacter marianensis DSM 12885     (2 CRISPRs)
Thermanaerovibrio acidaminovorans DSM 6589
Thermincola sp. JR     (7 CRISPRs)
Thermoanaerobacter brockii subsp. finnii Ako-1     (5 CRISPRs)
Thermoanaerobacter italicus Ab9     (4 CRISPRs)
Thermoanaerobacter mathranii subsp. mathranii str. A3     (3 CRISPRs)
Thermoanaerobacter pseudethanolicus ATCC 33223     (7 CRISPRs)
Thermoanaerobacter sp. X513     (4 CRISPRs)
Thermoanaerobacter sp. X514     (4 CRISPRs)
Thermoanaerobacter tengcongensis MB4     (3 CRISPRs)
Thermoanaerobacter wiegelii Rt8.B1     (3 CRISPRs)
Thermoanaerobacterium phage THSA-485A
Thermoanaerobacterium saccharolyticum JW/SL-YS485     (7 CRISPRs, 1 questionable structure)
Thermoanaerobacterium thermosaccharolyticum DSM 571     (5 CRISPRs)
Thermoanaerobacterium thermosaccharolyticum M0795     (4 CRISPRs)
Thermoanaerobacterium xylanolyticum LX-11     (3 CRISPRs, 1 questionable structure)
Thermobacillus composti KWC4     (11 CRISPRs, 3 questionable structures)
Thermobaculum terrenum ATCC BAA-798     (5 CRISPRs, 3 questionable structures)
Thermobifida fusca YX     (14 CRISPRs, 2 questionable structures)
Thermobispora bispora DSM 43833     (6 CRISPRs, 5 questionable structures)
Thermococcus litoralis DSM 5473     (7 CRISPRs)
Thermocrinis albus DSM 14484     (5 CRISPRs)
Thermodesulfatator indicus DSM 15286     (3 CRISPRs, 1 questionable structure)
Thermodesulfobacterium sp. OPB45     (2 CRISPRs, 1 questionable structure)
Thermodesulfobium narugense DSM 14796     (3 CRISPRs)
Thermodesulfovibrio yellowstonii DSM 11347     (5 CRISPRs)
Thermofilum sp. 1910b     (15 CRISPRs, 1 questionable structure)
Thermomicrobium roseum DSM 5159     (1 CRISPR, 2 questionable structures)
Thermomonospora curvata DSM 43183     (15 CRISPRs, 5 questionable structures)
Thermoplasmatales archaeon BRNA1
Thermosediminibacter oceani DSM 16646     (6 CRISPRs)
Thermosipho africanus TCF52B     (12 CRISPRs)
Thermosipho melanesiensis BI429     (5 CRISPRs)
Thermosynechococcus elongatus BP-1     (1 questionable structure)
Thermosynechococcus sp. NK55     (1 CRISPR)
Thermotoga elfii NBRC 107921     (3 CRISPRs, 1 questionable structure)
Thermotoga hypogea NBRC 106472     (4 CRISPRs)
Thermotoga lettingae TMO     (2 CRISPRs)
Thermotoga maritima MSB8     (16 CRISPRs)
Thermotoga naphthophila RKU-10     (8 CRISPRs)
Thermotoga neapolitana DSM 4359     (8 CRISPRs)
Thermotoga petrophila     (8 CRISPRs, 1 questionable structure)
Thermotoga sp. RQ2     (8 CRISPRs)
Thermotoga thermarum DSM 5069     (6 CRISPRs)
Thermovibrio ammonificans HB-1     (8 CRISPRs, 1 questionable structure)
Thermovirga lienii DSM 17291     (2 CRISPRs)
Thermus oshimai JL-2     (6 CRISPRs)
Thermus scotoductus SA-01     (3 CRISPRs, 1 questionable structure)
Thermus sp. CCB_US3_UF1     (8 CRISPRs)
Thermus thermophilus HB27     (10 CRISPRs)
Thermus thermophilus HB8     (11 CRISPRs)
Thermus thermophilus JL-18     (6 CRISPRs)
Thermus thermophilus SG0.5JP17-16     (6 CRISPRs, 1 questionable structure)
Thioalkalimicrobium cyclicum ALM1
Thioalkalivibrio nitratireducens DSM 14787     (6 CRISPRs, 3 questionable structures)
Thioalkalivibrio sp. HL-EbGR7     (3 CRISPRs, 5 questionable structures)
Thioalkalivibrio sp. K90mix     (2 CRISPRs)
Thiobacillus denitrificans ATCC 25259
Thiocystis violascens DSM 198     (4 CRISPRs, 5 questionable structures)
Thioflavicoccus mobilis 8321     (4 CRISPRs, 1 questionable structure)
Thiomicrospira crunogena XCL-2
Thiomicrospira denitrificans ATCC 33889     (1 questionable structure)
Thiomonas intermedia K12     (3 questionable structures)
Thiomonas sp. 3As     (1 questionable structure)
Tistrella mobilis KA081020-065     (8 CRISPRs, 1 questionable structure)
Tolumonas auensis DSM 9187     (1 CRISPR, 1 questionable structure)
Treponema azotonutricium ZAS-9     (2 CRISPRs, 1 questionable structure)
Treponema brennaborense DSM 12168     (2 CRISPRs, 8 questionable structures)
Treponema denticola ATCC 35405     (1 CRISPR)
Treponema pallidum str. Fribourg-Blanc
Treponema pallidum subsp. pallidum DAL-1
Treponema pallidum subsp. pallidum SS14
Treponema pallidum subsp. pallidum str. Chicago
Treponema pallidum subsp. pallidum str. Mexico A
Treponema pallidum subsp. pallidum str. Nichols
Treponema pallidum subsp. pertenue str. CDC2
Treponema pallidum subsp. pertenue str. Gauthier
Treponema pallidum subsp. pertenue str. SamoaD
Treponema paraluiscuniculi Cuniculi A
Treponema pedis str. T A4     (1 CRISPR)
Treponema primitia ZAS-2     (1 CRISPR, 1 questionable structure)
Treponema succinifaciens DSM 2489     (1 CRISPR)
Trichodesmium erythraeum IMS101     (1 CRISPR, 18 questionable structures)
Tropheryma whipplei str. Twist
Tropheryma whipplei TW08/27     (1 questionable structure)
Truepera radiovictrix DSM 17093     (9 CRISPRs)
Tsukamurella paurometabola DSM 20162
Turneriella parva DSM 21527     (3 questionable structures)
uncultured Sulfuricurvum sp. RIFRC-1
uncultured Termite group 1 bacterium phylotype Rs-D17     (2 CRISPRs)
Ureaplasma parvum serovar 3 str. ATCC 27815
Ureaplasma parvum serovar 3 str. ATCC 700970
Ureaplasma urealyticum serovar 10 str. ATCC 33699
Variovorax paradoxus B4     (1 questionable structure)
Variovorax paradoxus EPS     (1 questionable structure)
Variovorax paradoxus S110
Veillonella parvula DSM 2008     (10 CRISPRs)
Verminephrobacter eiseniae EF01-2     (3 CRISPRs)
Verrucosispora maris AB-18-032     (2 CRISPRs, 2 questionable structures)
Vibrio alginolyticus NBRC 15630 = ATCC 17749
Vibrio anguillarum 775     (1 questionable structure)
Vibrio cholerae IEC224
Vibrio cholerae LMA3984-4
Vibrio cholerae M66-2
Vibrio cholerae MJ-1236
Vibrio cholerae O1 biovar eltor str. N16961
Vibrio cholerae O1 str. 2010EL-1786
Vibrio cholerae O395     (2 CRISPRs, 1 questionable structure)
Vibrio fischeri ES114
Vibrio fischeri MJ11     (1 questionable structure)
Vibrio furnissii NCTC 11218
Vibrio harveyi ATCC BAA-1116     (2 CRISPRs, 6 questionable structures)
Vibrio nigripulchritudo
Vibrio parahaemolyticus BB22OP     (1 CRISPR)
Vibrio parahaemolyticus O1:K33 str. CDC_K4557
Vibrio parahaemolyticus O1:Kuk str. FDA_R31     (1 questionable structure)
Vibrio parahaemolyticus RIMD 2210633     (1 CRISPR)
Vibrio sp. EJY3
Vibrio sp. Ex25     (1 questionable structure)
Vibrio splendidus LGP32
Vibrio vulnificus CMCP6     (1 questionable structure)
Vibrio vulnificus MO6-24/O     (1 questionable structure)
Vibrio vulnificus YJ016     (2 CRISPRs)
Waddlia chondrophila WSU 86-1044     (1 questionable structure)
Weeksella virosa DSM 16922     (1 CRISPR)
Weissella koreensis KACC 15510     (1 questionable structure)
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)
Wolbachia endosymbiont of Culex quinquefasciatus Pel
Wolbachia endosymbiont of Drosophila melanogaster     (2 questionable structures)
Wolbachia endosymbiont of Drosophila simulans wHa
Wolbachia endosymbiont of Drosophila simulans wNo
Wolbachia endosymbiont of Onchocerca ochengi
Wolbachia endosymbiont strain TRS of Brugia malayi
Wolbachia sp. wRi     (2 questionable structures)
Wolinella succinogenes DSM 1740     (2 CRISPRs)
Xanthobacter autotrophicus Py2     (1 questionable structure)
Xanthomonas albilineans     (6 CRISPRs)
Xanthomonas axonopodis pv. citri str. 306     (1 CRISPR, 1 questionable structure)
Xanthomonas axonopodis pv. citrumelo F1
Xanthomonas axonopodis Xac29-1
Xanthomonas campestris pv. campestris str. 8004     (1 questionable structure)
Xanthomonas campestris pv. campestris str. ATCC 33913     (1 questionable structure)
Xanthomonas campestris pv. campestris str. B100     (1 questionable structure)
Xanthomonas campestris pv. raphani 756C     (2 CRISPRs)
Xanthomonas campestris pv. vesicatoria str. 85-10     (2 questionable structures)
Xanthomonas citri subsp. citri Aw12879
Xanthomonas fuscans subsp. fuscans
Xanthomonas oryzae pv. oryzae KACC10331     (1 CRISPR)
Xanthomonas oryzae pv. oryzae MAFF 311018     (1 CRISPR)
Xanthomonas oryzae pv. oryzae PXO99A     (1 CRISPR)
Xanthomonas oryzae pv. oryzicola BLS256
Xenorhabdus bovienii SS-2004     (3 CRISPRs, 3 questionable structures)
Xenorhabdus nematophila ATCC 19061     (4 CRISPRs, 1 questionable structure)
Xylanimonas cellulosilytica DSM 15894     (8 CRISPRs, 8 questionable structures)
Xylella fastidiosa 9a5c
Xylella fastidiosa M12     (1 questionable structure)
Xylella fastidiosa M23     (1 questionable structure)
Xylella fastidiosa subsp. fastidiosa GB514     (1 questionable structure)
Xylella fastidiosa Temecula1     (1 questionable structure)
Yersinia enterocolitica subsp. enterocolitica 8081
Yersinia enterocolitica subsp. palearctica 105.5R(r)
Yersinia enterocolitica subsp. palearctica Y11
Yersinia pestis A1122     (3 CRISPRs, 1 questionable structure)
Yersinia pestis Angola     (1 CRISPR)
Yersinia pestis Antiqua     (3 CRISPRs, 1 questionable structure)
Yersinia pestis biovar Medievalis str. Harbin 35     (3 CRISPRs, 1 questionable structure)
Yersinia pestis biovar Microtus str. 91001     (2 CRISPRs)
Yersinia pestis CO92     (3 CRISPRs)
Yersinia pestis D106004     (3 CRISPRs)
Yersinia pestis D182038     (3 CRISPRs, 1 questionable structure)
Yersinia pestis KIM     (3 CRISPRs, 1 questionable structure)
Yersinia pestis Nepal516     (3 CRISPRs)
Yersinia pestis Pestoides F     (3 CRISPRs)
Yersinia pestis Z176003     (3 CRISPRs)
Yersinia pseudotuberculosis IP 31758     (2 CRISPRs)
Yersinia pseudotuberculosis IP 32953     (3 CRISPRs, 3 questionable structures)
Yersinia pseudotuberculosis PB1/+     (3 CRISPRs, 3 questionable structures)
Yersinia pseudotuberculosis YPIII     (3 CRISPRs)
Zobellia galactanivorans     (1 questionable structure)
Zunongwangia profunda SM-A87     (2 CRISPRs, 1 questionable structure)
Zymomonas mobilis subsp. mobilis ATCC 10988     (3 CRISPRs, 1 questionable structure)
Zymomonas mobilis subsp. mobilis ATCC 29191     (3 CRISPRs)
Zymomonas mobilis subsp. mobilis NCIMB 11163     (4 CRISPRs)
Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023     (3 CRISPRs)
Zymomonas mobilis subsp. mobilis ZM4     (3 CRISPRs)
Zymomonas mobilis subsp. pomaceae ATCC 29192     (4 CRISPRs)
[Eubacterium] cylindroides T2-87     (2 questionable structures)

Archea

Acidianus hospitalis W1     (6 CRISPRs, 3 questionable structures)
Acidilobus saccharovorans 345-15     (7 CRISPRs)
Aciduliprofundum boonei T469     (2 CRISPRs)
Aciduliprofundum sp. MAR08-339     (2 CRISPRs, 1 questionable structure)
Aeropyrum pernix K1     (3 CRISPRs, 1 questionable structure)
Archaeoglobus fulgidus DSM 4304     (3 CRISPRs)
Archaeoglobus profundus DSM 5631
Archaeoglobus sulfaticallidus PM70-1     (2 CRISPRs)
Archaeoglobus veneficus SNP6     (2 CRISPRs)
Caldisphaera lagunensis DSM 15908     (3 questionable structures)
Candidatus Korarchaeum cryptofilum OPF8     (2 CRISPRs, 2 questionable structures)
Candidatus Methanoregula boonei 6A8
Candidatus Methanosphaerula palustris E1-9c     (2 CRISPRs, 4 questionable structures)
Cenarchaeum symbiosum A
Desulfurococcus fermentans DSM 16532     (1 CRISPR)
Desulfurococcus kamchatkensis 1221n     (2 CRISPRs)
Desulfurococcus mucosus DSM 2162     (4 CRISPRs)
Ferroglobus placidus DSM 10642     (6 CRISPRs, 1 questionable structure)
Fervidicoccus fontis Kam940     (4 CRISPRs, 2 questionable structures)
Halalkalicoccus jeotgali B3
Haloarcula hispanica ATCC 33960     (1 CRISPR)
Haloarcula marismortui ATCC 43049     (4 CRISPRs, 2 questionable structures)
Halobacterium salinarum R1     (1 questionable structure)
Halobacterium sp. NRC-1
Haloferax mediterranei ATCC 33500     (6 CRISPRs, 2 questionable structures)
Haloferax volcanii DS2     (3 CRISPRs, 3 questionable structures)
Halogeometricum borinquense DSM 11551     (1 CRISPR, 4 questionable structures)
Halomicrobium mukohataei DSM 12286     (2 CRISPRs, 5 questionable structures)
halophilic archaeon DL31     (2 CRISPRs, 2 questionable structures)
Halopiger xanaduensis SH-6     (1 questionable structure)
Haloquadratum walsbyi C23     (3 CRISPRs, 1 questionable structure)
Haloquadratum walsbyi DSM 16790     (2 CRISPRs)
Halorhabdus utahensis DSM 12940     (1 CRISPR)
Halorubrum lacusprofundi ATCC 49239     (5 CRISPRs, 2 questionable structures)
Haloterrigena turkmenica DSM 5511     (7 questionable structures)
Halovivax ruber XH-70
Hyperthermus butylicus DSM 5456     (2 CRISPRs)
Ignicoccus hospitalis KIN4/I     (12 CRISPRs)
Ignisphaera aggregans DSM 17230     (8 CRISPRs)
Metallosphaera cuprina Ar-4     (2 CRISPRs, 1 questionable structure)
Metallosphaera sedula DSM 5348     (4 CRISPRs)
Methanobacterium sp. AL-21     (1 CRISPR, 1 questionable structure)
Methanobacterium sp. SWAN-1     (1 CRISPR, 1 questionable structure)
Methanobrevibacter ruminantium M1     (3 CRISPRs, 22 questionable structures)
Methanobrevibacter smithii ATCC 35061     (1 CRISPR, 4 questionable structures)
Methanobrevibacter sp. AbM4     (1 CRISPR, 5 questionable structures)
Methanocaldococcus fervens AG86     (8 CRISPRs)
Methanocaldococcus infernus ME     (14 CRISPRs)
Methanocaldococcus jannaschii DSM 2661     (20 CRISPRs)
Methanocaldococcus sp. FS406-22     (23 CRISPRs, 2 questionable structures)
Methanocaldococcus vulcanius M7     (20 CRISPRs, 1 questionable structure)
Methanocella paludicola SANAE     (4 questionable structures)
Methanocella sp. HZ254     (1 CRISPR, 4 questionable structures)
Methanococcoides burtonii DSM 6242     (2 CRISPRs, 1 questionable structure)
Methanococcus aeolicus Nankai-3     (1 CRISPR, 1 questionable structure)
Methanococcus maripaludis C5     (1 CRISPR, 4 questionable structures)
Methanococcus maripaludis C6
Methanococcus maripaludis C7
Methanococcus maripaludis S2
Methanococcus maripaludis X1     (1 CRISPR, 1 questionable structure)
Methanococcus vannielii SB     (2 CRISPRs)
Methanococcus voltae A3     (3 CRISPRs, 2 questionable structures)
Methanocorpusculum labreanum Z     (1 CRISPR, 4 questionable structures)
Methanoculleus bourgensis MS2     (1 CRISPR, 3 questionable structures)
Methanoculleus marisnigri JR1     (1 CRISPR, 1 questionable structure)
Methanohalobium evestigatum Z-7303     (1 questionable structure)
Methanohalophilus mahii DSM 5219
Methanolobus psychrophilus R15     (2 questionable structures)
Methanomassiliicoccus sp. Mx1-Issoire     (2 CRISPRs, 1 questionable structure)
Methanomethylovorans hollandica DSM 15978     (3 CRISPRs)
Methanoplanus petrolearius DSM 11571     (1 questionable structure)
Methanopyrus kandleri AV19     (5 CRISPRs)
Methanoregula formicicum SMSP     (2 CRISPRs, 2 questionable structures)
Methanosaeta concilii GP-6     (6 CRISPRs)
Methanosaeta harundinacea 6Ac     (1 CRISPR, 4 questionable structures)
Methanosaeta thermophila PT     (2 CRISPRs, 17 questionable structures)
Methanosalsum zhilinae DSM 4017     (1 CRISPR, 1 questionable structure)
Methanosarcina acetivorans C2A     (5 CRISPRs, 5 questionable structures)
Methanosarcina barkeri str. fusaro     (4 CRISPRs, 15 questionable structures)
Methanosarcina mazei Go1     (4 CRISPRs, 4 questionable structures)
Methanosarcina mazei Tuc01     (3 CRISPRs, 8 questionable structures)
Methanosphaera stadtmanae DSM 3091     (3 CRISPRs)
Methanospirillum hungatei JF-1     (7 CRISPRs)
Methanothermobacter marburgensis str. Marburg     (2 CRISPRs, 11 questionable structures)
Methanothermobacter thermautotrophicus str. Delta H     (2 CRISPRs, 12 questionable structures)
Methanothermococcus okinawensis IH1     (8 CRISPRs, 2 questionable structures)
Methanothermus fervidus DSM 2088
Methanotorris igneus Kol 5     (25 CRISPRs)
Nanoarchaeum equitans Kin4-M     (2 CRISPRs)
Natrialba magadii ATCC 43099     (2 CRISPRs, 3 questionable structures)
Natrinema pellirubrum DSM 15624     (1 CRISPR, 1 questionable structure)
Natrinema sp. J7-2     (3 CRISPRs)
Natronobacterium gregoryi SP2     (1 CRISPR, 2 questionable structures)
Natronococcus occultus SP4     (1 CRISPR, 9 questionable structures)
Natronomonas moolapensis 8.8.11     (4 questionable structures)
Natronomonas pharaonis DSM 2160     (4 CRISPRs, 1 questionable structure)
Nitrosopumilus maritimus SCM1     (1 CRISPR, 1 questionable structure)
Picrophilus torridus DSM 9790     (4 CRISPRs)
Pyrobaculum aerophilum str. IM2     (6 CRISPRs)
Pyrobaculum arsenaticum DSM 13514     (4 CRISPRs)
Pyrobaculum calidifontis JCM 11548     (7 CRISPRs)
Pyrobaculum islandicum DSM 4184     (5 CRISPRs)
Pyrobaculum oguniense TE7     (5 CRISPRs)
Pyrobaculum sp. 1860     (8 CRISPRs, 1 questionable structure)
Pyrococcus abyssi GE5     (4 CRISPRs)
Pyrococcus furiosus COM1     (8 CRISPRs)
Pyrococcus furiosus DSM 3638     (8 CRISPRs)
Pyrococcus horikoshii OT3     (6 CRISPRs)
Pyrococcus sp. NA2     (2 CRISPRs)
Pyrococcus sp. ST04     (8 CRISPRs)
Pyrococcus yayanosii CH1     (7 CRISPRs)
Pyrolobus fumarii 1A     (7 CRISPRs)
Salinarchaeum sp. Harcht-Bsk1
Staphylothermus hellenicus DSM 12710     (6 CRISPRs, 2 questionable structures)
Staphylothermus marinus F1     (11 CRISPRs)
Sulfolobus acidocaldarius DSM 639     (4 CRISPRs)
Sulfolobus acidocaldarius N8     (4 CRISPRs)
Sulfolobus acidocaldarius Ron12/I     (4 CRISPRs)
Sulfolobus islandicus HVE10/4     (4 CRISPRs, 2 questionable structures)
Sulfolobus islandicus L.D.8.5     (4 CRISPRs, 2 questionable structures)
Sulfolobus islandicus L.S.2.15     (4 CRISPRs, 1 questionable structure)
Sulfolobus islandicus LAL14/1     (6 CRISPRs, 3 questionable structures)
Sulfolobus islandicus M.14.25     (3 CRISPRs, 2 questionable structures)
Sulfolobus islandicus M.16.27     (3 CRISPRs, 1 questionable structure)
Sulfolobus islandicus M.16.4     (2 CRISPRs, 1 questionable structure)
Sulfolobus islandicus REY15A     (4 CRISPRs, 2 questionable structures)
Sulfolobus islandicus Y.G.57.14     (2 CRISPRs, 1 questionable structure)
Sulfolobus islandicus Y.N.15.51     (3 CRISPRs)
Sulfolobus solfataricus 98/2     (4 CRISPRs, 5 questionable structures)
Sulfolobus solfataricus P2     (7 CRISPRs, 3 questionable structures)
Sulfolobus tokodaii str. 7     (5 CRISPRs, 3 questionable structures)
Thermococcus barophilus MP     (4 CRISPRs)
Thermococcus gammatolerans EJ3     (3 CRISPRs)
Thermococcus kodakarensis KOD1     (3 CRISPRs)
Thermococcus onnurineus NA1     (6 CRISPRs)
Thermococcus sibiricus MM 739     (1 CRISPR)
Thermococcus sp. 4557     (5 CRISPRs)
Thermococcus sp. AM4     (3 CRISPRs)
Thermococcus sp. CL1     (11 CRISPRs, 1 questionable structure)
Thermofilum pendens Hrk 5     (10 CRISPRs)
Thermogladius sp. 1633     (2 CRISPRs)
Thermoplasma acidophilum DSM 1728     (1 CRISPR, 1 questionable structure)
Thermoplasma volcanium GSS1     (2 CRISPRs)
Thermoproteus neutrophilus V24Sta     (10 CRISPRs)
Thermoproteus tenax Kra 1     (7 CRISPRs)
Thermoproteus uzoniensis 768-20
Thermosphaera aggregans DSM 11486     (1 CRISPR)
uncultured methanogenic archaeon RC-I
Vulcanisaeta distributa DSM 14429     (9 CRISPRs)
Vulcanisaeta moutnovskia 768-28     (4 CRISPRs)